Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PABPC1'

Total of fusion sequences: 11 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
D.Melanogaster
SplGraphs pAbp
P21187

NM_166264.4
1..82
100.0%
+
2R
pAbp
P21187

NM_166264.4
83..327
100.0%
+
2R
6
0
0
exon-exon
2
D.Melanogaster
SplGraphs CG15212
Q9VRK1

NM_144201.4
1..75
100.0%
+
3L
pAbp
P21187

NM_166264.4
67..527
100.0%
+
2R
1
0
0
exon-exon
3
D.Melanogaster
SplGraphs
NM_079341.2
1..109
100.0%
-
3L
pAbp
P21187

NM_166264.4
106..718
99.9%
+
2R
1
0
0
exon-exon
4
D.Melanogaster
pAbp
P21187

NM_166264.4
18..113
100.0%
-
2R
pAbp
P21187

NM_166264.4
104..484
98.7%
+
2R
6
225
11
exon-exon
5
D.Melanogaster
pAbp
P21187

NM_166264.4
8..158
100.0%
+
2R
pAbp
P21187

NM_166264.4
159..444
100.0%
+
2R
6
57
41
exon-exon
6
D.Melanogaster
pAbp
P21187

NM_166264.4
8..103
100.0%
+
2R
pAbp
P21187

NM_166264.4
104..159
100.0%
+
2R
6
2
1
exon-exon
7
D.Melanogaster
pAbp
P21187

NM_166264.4
1..95
100.0%
+
2R
pAbp
P21187

NM_166264.4
96..153
98.3%
+
2R
6
2
1
exon-exon
8
D.Melanogaster
pAbp
P21187

NM_166264.4
1..186
100.0%
+
2R
pAbp
P21187

NM_166264.4
182..512
98.2%
+
2R
6
1
0
exon-exon
9
D.Melanogaster
pAbp
P21187

NM_166264.4
1..186
100.0%
+
2R
pAbp
P21187

NM_166264.4
182..511
98.2%
+
2R
6
1
0
exon-exon
10
D.Melanogaster
pAbp
P21187

NM_166264.4
8..89
100.0%
+
2R
pAbp
P21187

NM_166264.4
90..334
100.0%
+
2R
6
0
0
exon-exon

T o p