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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PABPC1'

Total of fusion sequences: 60 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
XM_005250861.3
35..352
98.4%
-
8

XM_005250861.3
351..424
100.0%
-
8
0
8470
4647
exon-exon
2
Homo Sapiens
SplGraphs
XM_005250861.3
170..232
95.3%
-
8

NM_001935.3
223..512
98.3%
-
2
1
0
0
exon-exon
3
Homo Sapiens
SplGraphs
XM_017022206.2
1..146
100.0%
-
15

XM_005250861.3
141..562
99.3%
-
8
1
0
0
exon-exon
4
Homo Sapiens
SplGraphs
HLA-DQB1

NM_001243961.1
1..418
96.9%
-
6

XM_005250861.3
414..560
100.0%
-
8
1
0
0
exon-exon
5
Homo Sapiens
SplGraphs
XM_005250861.3
1..200
98.0%
-
8

XM_017015585.1
200..402
98.6%
-
10
1
0
0
exon-exon
6
Homo Sapiens
ChimerDB
XM_005250861.3
1..47
100.0%
+
8

NM_007126.4
47..707
99.1%
-
9
1
0
0
exon-exon
7
Homo Sapiens
ChimerDB RNR1
A0A0C5B5G6
9..496
99.6%
+
MT

XM_005250861.3
487..636
100.0%
-
8
1
0
0
intron-exon
8
Homo Sapiens
SplGraphs
XM_005250861.3
61..207
97.9%
-
8

XM_006719364.4
190..628
99.6%
+
12
1
0
0
exon-exon
9
Homo Sapiens

NM_002568.3
2..344
99.5%
-
8

NM_002568.3
342..395
100.0%
+
8
0
1313
1960
exon-exon
10
Homo Sapiens

NM_002568.3
1..43
100.0%
+
8

NM_002568.3
11..101
96.2%
-
8
0
1313
1960
exon-intron

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