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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'PABPC1'

Total of fusion sequences: 60 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo SapiensSplGraphs
XM_005250861.3
35..352
98.4%
-
8

XM_005250861.3
351..424
100.0%
-
8
0
8470
4647
exon-exon
Homo SapiensSplGraphs
XM_005250861.3
170..232
95.3%
-
8

NM_001935.3
223..512
98.3%
-
2
1
0
0
exon-exon
Homo SapiensSplGraphs
XM_017022206.2
1..146
100.0%
-
15

XM_005250861.3
141..562
99.3%
-
8
1
0
0
exon-exon
Homo SapiensSplGraphs
HLA-DQB1

NM_001243961.1
1..418
96.9%
-
6

XM_005250861.3
414..560
100.0%
-
8
1
0
0
exon-exon
Homo SapiensSplGraphs
XM_005250861.3
1..200
98.0%
-
8

XM_017015585.1
200..402
98.6%
-
10
1
0
0
exon-exon
Homo Sapiens ChimerDB
XM_005250861.3
1..47
100.0%
+
8

NM_007126.4
47..707
99.1%
-
9
1
0
0
exon-exon
Homo Sapiens ChimerDB RNR1
A0A0C5B5G6
9..496
99.6%
+
MT

XM_005250861.3
487..636
100.0%
-
8
1
0
0
intron-exon
Homo SapiensSplGraphs
XM_005250861.3
61..207
97.9%
-
8

XM_006719364.4
190..628
99.6%
+
12
1
0
0
exon-exon
Homo Sapiens
NM_002568.3
1..43
100.0%
+
8

NM_002568.3
11..101
96.2%
-
8
0
1313
1960
exon-intron
Homo Sapiens
NM_002568.3
2..344
99.5%
-
8

NM_002568.3
342..395
100.0%
+
8
0
1313
1960
exon-exon

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