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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Notch1'

Total of fusion sequences: 8 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens

NM_017617.4
1..59
100.0%
-
9

NM_005085.3
58..133
100.0%
+
9
1
0
0
exon-exon1RNA-seq
BREAKPOINTs
21247443
2
Mus musculus

ENSMUST00000108832
1..124
99.2%
-
8

NM_008714.3
123..283
100.0%
-
2
1
0
0
intron-exon
3
Mus musculus

NM_008714.3
18..413
99.8%
-
2
Gm43016 411..434
100.0%
-
5
1
0
0
exon-intron
4
Mus musculus

NM_008714.3
1..31
100.0%
-
2

NM_008714.3
24..743
99.4%
+
2
1
0
0
exon-exon
5
Mus musculus

ENSMUST00000021592
15..46
100.0%
+
12

NM_008714.3
22..600
99.5%
+
2
1
0
0
intron-exon
6
Homo Sapiens

NM_017617.4
6..499
99.6%
-
9

NM_012335.3
491..519
100.0%
+
19
1
0
0
exon-intron
7
Homo Sapiens

NM_022138.2
27..269
98.8%
+
6

NM_017617.4
259..282
100.0%
+
9
1
0
0
exon-intron
8
Mus musculus
0610009E02Rik
XR_866057.2
1..645
99.1%
+
2

NM_008714.3
646..763
99.1%
+
2
1
0
0
exon-exon

T o p