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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'Notch1'

Total of fusion sequences: 5 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Mus musculus
ENSMUST00000108832
1..124
99.2%
-
8

NM_008714.3
123..283
100.0%
-
2
1
0
0
intron-exon
Mus musculus
NM_008714.3
18..413
99.8%
-
2
Gm43016 411..434
100.0%
-
5
1
0
0
exon-intron
Mus musculus
NM_008714.3
1..31
100.0%
-
2

NM_008714.3
24..743
99.4%
+
2
1
0
0
exon-exon
Mus musculus
ENSMUST00000021592
15..46
100.0%
+
12

NM_008714.3
22..600
99.5%
+
2
1
0
0
intron-exon
Mus musculus 0610009E02Rik
XR_866057.2
1..645
99.1%
+
2

NM_008714.3
646..763
99.1%
+
2
1
0
0
exon-exon

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