Search Database Collection

Result for the search: Gene Name/NCBI ID(s): 'Nlk'

Total of fusion sequences: 2 (from 393,531 parsed EST/mRNAs. Last update 2018-11-20)

Organism	Fusion: Graphical View, Annotation, PPI	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed, iHOP reference
		Name(s)1	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,17	8	9,10,11	12,25	13,14,15	16	17
Mus musculus	BU921980 ANNOTATION OF CHIMERA FUSION GenBank ID: BU921980 FASTA Head Gene (1) Alignment: Trp53bp1 Tail Gene (2) Alignment: Nlk Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 27223 2 + 121090869 121090891 NA NA protein-coding 18099 11 - 78440165 78509645 NA NA protein-coding NA mm9 Updated: 2012-09-25 Owner: ChiTaRS	Trp53bp1 A2AU90 F6QNC8 F6S5E4 F6VCK5 F6ZRL3 F7CE65 P70399 Q3UG49 Q3V1P7 Q8BLA0 Q8BZ87 Q8C0U1	218..240 100.0%	+ 2	Nlk F6QKY6 O54949 Q3TV73	221..599 99.5%	- 11	1 0 0
Mus musculus	CK346048 ANNOTATION OF CHIMERA FUSION GenBank ID: CK346048 FASTA Head Gene (1) Alignment: Nlk Tail Gene (2) Alignment: Rnf152 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 18099 11 + 78478457 78478527 NA NA protein-coding 320311 1 + 107178583 107179074 NA NA protein-coding NA mm9 Updated: 2012-09-25 Owner: ChiTaRS	Nlk F6QKY6 O54949 Q3TV73	12..82 98.6%	+ 11	Rnf152 Q8BG47	76..567 100.0%	+ 1	1 0 0