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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Nfrkb'

Total of fusion sequences: 20 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

NM_011321.3
35..585
98.1%
+
17

XM_006510221.3
583..615
100.0%
+
9
1
0
0
exon-intron
2
Mus musculus

NM_011321.3
26..582
98.4%
+
17

XM_006510221.3
580..612
100.0%
+
9
1
0
0
exon-intron
3
Mus musculus

NM_025385.3
44..566
99.9%
+
15

XM_006510221.3
566..598
100.0%
+
9
1
0
0
exon-intron
4
Mus musculus

XM_006518733.1
20..530
99.7%
+
14

XM_006510221.3
491..565
97.7%
+
9
1
0
0
exon-intron
5
Mus musculus
Gm7331 20..511
99.1%
+
X

XM_006510221.3
510..542
100.0%
+
9
1
0
0
exon-intron
6
Mus musculus
Gm46219
XR_001779752.1
1..523
99.9%
-
10

XM_006510221.3
432..542
95.4%
-
9
1
0
0
intron-intron
7
Mus musculus

NM_026030.2
57..543
99.2%
-
2

XM_006510221.3
529..559
100.0%
+
9
1
0
0
exon-intron
8
Mus musculus
Rpl37rt
NM_001271590.1
41..409
99.5%
-
5

XM_006510221.3
395..427
100.0%
+
9
1
0
0
intron-intron
9
Mus musculus
Malat1
B0LAE7

NR_002847.2
35..783
99.5%
-
19

XM_006510221.3
776..816
96.7%
+
9
1
0
0
exon-intron
10
Mus musculus

NM_008986.2
32..448
100.0%
-
11

XM_006510221.3
447..482
100.0%
+
9
1
0
0
exon-intron

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