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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Ndfip1'

Total of fusion sequences: 8 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

NM_022996.1
1..34
100.0%
+
18

XR_001781502.1
27..905
96.6%
-
15
1
0
0
intron-exon
2
Mus musculus

NM_017372.3
1..552
100.0%
-
10

NM_022996.1
546..578
100.0%
-
18
1
0
0
exon-intron
3
Mus musculus

XM_006526149.1
43..543
99.9%
+
18
Gm33228
XR_877243.1
543..571
100.0%
-
18
1
0
0
exon-intron
4
Mus musculus

NM_009188.4
1..711
100.0%
+
8

NM_022996.1
708..737
100.0%
-
18
1
0
0
exon-intron
5
Mus musculus

NM_022996.1
74..395
98.6%
+
18

XM_017317986.1
396..420
98.6%
+
18
1
0
0
intron-intron
6
Mus musculus

NM_016786.4
20..450
99.4%
+
5

ENSMUST00000236052
301..657
95.2%
+
18
1
0
0
intron-intron
7
Mus musculus

NM_001272058.1
14..33
100.0%
-
8

XM_006526149.1
31..292
98.1%
-
18
1
0
0
intron-exon
8
Mus musculus

XM_006526149.1
1..362
99.5%
+
18

NM_029606.3
358..382
100.0%
-
11
1
0
0
exon-intron

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