Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec Hits Read-through Chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'Nap1l1'

Total of fusion sequences: 12 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Mus musculus Lipo3
ENSMUST00000112508
1..26
96.2%
+
19

NM_015781.4
17..450
100.0%
+
10
1
0
0
intron-exon
Mus musculus AC133607.3 7..29
100.0%
-
18

XM_006513890.3
23..410
97.7%
-
10
1
0
0
intron-exon
Mus musculus
XM_006513890.3
9..168
100.0%
+
10
1700019L22Rik
XR_001778779.1
160..214
100.0%
-
8
1
0
0
exon-intron
Mus musculus
XM_006513890.3
268..295
100.0%
-
10

XM_006513890.3
291..603
100.0%
+
10
1
0
0
exon-exon
Mus musculus Gm4204 10..46
97.3%
+
1

NM_015781.4
18..704
100.0%
+
10
3
230
137
exon-exon
Mus musculus Gm4204 1..174
100.0%
+
1

NM_015781.4
20..414
100.0%
+
10
3
230
137
exon-exon
Mus musculus
NM_015781.4
1..584
100.0%
+
10
Gm4204 11..600
98.9%
+
1
3
0
0
exon-exon
Mus musculus
NM_015781.4
1..589
100.0%
+
10
Gm4204 16..600
98.8%
+
1
3
0
0
exon-exon
Mus musculus Dmrt1
Q9QZ59

NM_015826.5
11..95
97.0%
+
19

XM_006513890.3
33..430
99.5%
-
10
1
0
0
intron-exon
Mus musculus
XR_001779557.1
1..165
95.1%
+
10

NM_001252457.1
163..338
99.5%
+
17
1
0
0
exon-exon