Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'NUP88'

Total of fusion sequences: 5 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Mus musculus
XM_017321129.1
1..100
100.0%
-
5

NM_001083331.2
96..424
100.0%
-
11
1
0
0
intron-exon
Mus musculus
NM_001083331.2
4..497
99.8%
-
11

XR_001782566.1
473..505
96.9%
+
19
1
0
0
exon-intron
Mus musculus
NM_001083331.2
12..501
98.8%
-
11

XM_011242873.1
502..548
97.9%
+
9
1
0
0
intron-intron
Mus musculus 81..113
100.0%
-
5
104..375
99.3%
-
11
1
0
0
exon-exon
Mus musculus
NM_001083331.2
1..99
95.7%
+
11

NM_001083331.2
99..405
99.5%
+
11
1
0
0
intron-intron

T o p