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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'NUP88'

Total of fusion sequences: 12 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
XM_017024694.2
1..103
96.7%
-
17

NM_001271842.1
104..363
96.7%
-
17
1
0
0
intron-intron
2
Homo Sapiens
ChimerDB
XM_017024694.2
1..104
96.5%
-
17

NM_001271842.1
105..403
96.5%
-
17
1
0
0
intron-intron
3
Homo Sapiens
SplGraphs
XM_017005991.1
1..126
100.0%
-
3

XM_017024694.2
127..577
100.0%
-
17
1
0
0
intron-exon
4
Homo Sapiens

NM_018122.4
27..899
97.9%
+
1

XM_011523893.3
897..918
100.0%
-
17
1
0
0
exon-intron
5
Mus musculus

XM_017321129.1
1..100
100.0%
-
5

NM_001083331.2
96..424
100.0%
-
11
1
0
0
intron-exon
6
Mus musculus

NM_001083331.2
4..497
99.8%
-
11

XR_001782566.1
473..505
96.9%
+
19
1
0
0
exon-intron
7
Mus musculus

NM_001083331.2
12..501
98.8%
-
11

XM_011242873.1
502..548
97.9%
+
9
1
0
0
intron-intron
8
Homo Sapiens

NM_012426.4
44..157
100.0%
-
16

XM_017024694.2
155..228
100.0%
+
17
1
0
0
intron-exon
9
Homo Sapiens

XM_011523893.3
1..25
95.4%
+
17

XM_024451105.1
16..116
98.0%
-
18
1
0
0
intron-intron
10
Mus musculus
81..113
100.0%
-
5
104..375
99.3%
-
11
1
0
0
exon-exon

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