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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'NUP88'

Total of fusion sequences: 7 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens ChimerDB
XM_017024694.2
1..103
96.7%
-
17

NM_001271842.1
104..363
96.7%
-
17
1
0
0
intron-intron
Homo Sapiens ChimerDB
XM_017024694.2
1..104
96.5%
-
17

NM_001271842.1
105..403
96.5%
-
17
1
0
0
intron-intron
Homo SapiensSplGraphs
XM_017005991.1
1..126
100.0%
-
3

XM_017024694.2
127..577
100.0%
-
17
1
0
0
intron-exon
Homo Sapiens
NM_018122.4
27..899
97.9%
+
1

XM_011523893.3
897..918
100.0%
-
17
1
0
0
exon-intron
Homo Sapiens
NM_012426.4
44..157
100.0%
-
16

XM_017024694.2
155..228
100.0%
+
17
1
0
0
intron-exon
Homo Sapiens
XM_011523893.3
1..25
95.4%
+
17

XM_024451105.1
16..116
98.0%
-
18
1
0
0
intron-intron
Homo Sapiens
XM_011523893.3
1..140
95.4%
-
17

XM_017005195.2
126..380
98.2%
-
2
1
0
0
intron-exon

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