Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'NPEPPS'

Total of fusion sequences: 6 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
XM_011540599.2
19..106
97.8%
+
1

XM_017025373.1
98..357
98.9%
+
17
1
0
0
exon-exon
2
Homo Sapiens

NM_001247987.1
89..224
99.3%
+
11

XM_017025372.2
210..3740
99.8%
+
17
1
0
0
exon-exon
3
Homo Sapiens
LOC112268184
XM_024451054.1
1..7
100.0%
-
17

XM_017025373.1
8..375
100.0%
-
17
2
65
446
exon-intron
4
Homo Sapiens
LOC112268184
XM_024451054.1
5..87
100.0%
-
17

XM_017025373.1
81..420
100.0%
+
17
2
65
446
exon-exon
5
Homo Sapiens

XM_017025373.1
1..97
96.2%
-
17
MRPL45P2
NR_033934.1
98..155
96.2%
-
17
1
0
0
intron-intron
6
Homo Sapiens

XM_017025373.1
9..386
99.0%
+
17

XM_017025373.1
381..746
100.0%
+
17
1
0
0
intron-exon

T o p