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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'NPAS2'

Total of fusion sequences: 6 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens
XM_017004216.1
9..312
100.0%
+
2

XM_011537188.3
180..317
96.8%
+
14
1
0
0
intron-intron
Homo Sapiens
XM_017004216.1
9..312
100.0%
+
2

XM_011537188.3
180..317
96.8%
+
14
1
0
0
intron-intron
Homo Sapiens
NM_001010.2
6..210
100.0%
+
9

NM_002518.3
209..435
100.0%
+
2
1
0
0
exon-exon
Homo Sapiens
NM_001010.2
1..140
99.3%
+
9

NM_002518.3
139..462
100.0%
+
2
1
0
0
exon-exon
Homo Sapiens
XM_017004216.1
7..334
99.7%
-
2
LOC105375643
XR_001746003.1
331..425
99.0%
+
8
1
0
0
intron-intron
Homo Sapiens
NM_001350475.1
9..164
95.5%
+
1

NM_002518.3
164..311
97.5%
-
2
1
0
0
intron-intron

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