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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'NKX3-1'

Total of fusion sequences: 4 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
LOC105375044
XR_926767.3
2..388
98.7%
+
6
NKX3-1
Q99801

NM_001256339.1
373..436
100.0%
-
8
1
0
0
intron-exon
2
Homo Sapiens
NKX3-1
Q99801

NM_001256339.1
11..131
99.2%
-
8
LOC105372853
XR_951226.2
98..166
97.3%
+
22
1
0
0
exon-intron
3
Homo Sapiens
NKX3-1
Q99801

NM_001256339.1
9..277
99.7%
-
8
LOC107986930
XR_001745842.1
16..282
99.7%
-
8
1
0
0
exon-intron
4
Homo Sapiens
NKX3-1
Q99801

NM_001256339.1
7..289
99.0%
-
8
LOC105373718
XR_923526.2
282..306
100.0%
-
2
1
0
0
exon-intron

T o p