Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'NFIC'

Total of fusion sequences: 32 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens ChimerDB
XM_017026834.2
1..214
100.0%
+
19

NM_000391.3
210..561
99.8%
-
11
1
0
0
exon-exon
Homo Sapiens ChimerDB
NM_205843.2
2..326
99.4%
-
19
VSTM4
Q8IW00

XM_017015827.2
326..449
100.0%
+
10
1
0
0
exon-exon
Mus musculus
NM_008688.3
1..145
100.0%
+
10

NM_008688.3
141..448
98.1%
+
10
1
0
0
exon-exon
Mus musculus
NM_011202.3
93..1859
99.9%
-
5

NM_008688.3
1860..2030
100.0%
+
10
1
0
0
exon-exon
Homo Sapiens
XM_006711992.2
1..5387
100.0%
+
2

NM_205843.2
5351..5403
97.0%
+
19
1
0
0
exon-exon
Homo Sapiens LOC105369197
XR_001753987.1
2..53
97.7%
-
19

NM_001245002.1
15..259
100.0%
-
19
1
0
0
intron-exon
Homo Sapiens LOC105369197
XR_001753987.1
2..53
97.7%
-
19

NM_001245002.1
15..257
100.0%
-
19
1
0
0
intron-exon
Homo Sapiens
XR_950809.2
13..157
99.4%
+
16

XM_017026834.2
149..260
99.2%
-
19
1
0
0
exon-exon
Homo Sapiens
XR_950809.2
18..162
98.7%
+
16

XM_017026834.2
154..344
99.5%
-
19
1
0
0
exon-exon
Homo Sapiens
NM_001245002.1
5..269
99.7%
+
19
LINC01476
NR_110813.1
230..300
97.3%
-
17
1
0
0
exon-intron

T o p