Result for the search: Gene Name/NCBI ID(s): 'NF2'

Total of fusion sequences: 14 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	-	16	17
Homo Sapiens	BF339912 ANNOTATION OF CHIMERA FUSION GenBank ID: BF339912 FASTA Head Gene (1) Alignment: TWF2 | OMIM: 607433 Tail Gene (2) Alignment: NF2 | OMIM: 607379 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 11344 3 - 52228610 52229013 1 1 protein-coding 4771 22 + 29616741 29616763 17 0 oncogene, tumor suppressor 421 hg38 Updated: 2019-01-02 Owner: ChiTaRS	TWF2 D6RG15 Q6IBS0 NM_007284.3	2..404 100.0%	- 3	NF2 A0A024R1D9 A0A024R1F6 A0A024R1I0 A0A024R1J8 A0A024R1J9 A0A286SD19 A0A286SD20 A0A286SD34 A5A158 P35240 Q16230 Q16231 Q16232 Q16233 Q16276 Q7KZ66 Q9NRW8 XM_017028810.1	399..421 100.0%	+ 22	1 0 0	exon-intron
Homo Sapiens	BF666966 ANNOTATION OF CHIMERA FUSION GenBank ID: BF666966 FASTA Head Gene (1) Alignment: NF2 | OMIM: 607379 Tail Gene (2) Alignment: NF2 | OMIM: 607379 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4771 22 + 29695627 29695784 17 1 oncogene, tumor suppressor 4771 22 - 29696222 29696753 1 1 oncogene, tumor suppressor 851 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to FERM_N (PF09379, IPR018979) 65 173 234 6.7e-15 41.200 FERM N-terminal domain FERM_M (PF00373, IPR019748) 118 252 369 1.4e-30 92.400 FERM central domain FERM_C (PF09380, IPR018980) 94 373 462 1e-27 82.700 FERM C-terminal PH-like domain ERM (PF00769, IPR011259) 243 494 742 1.7e-75 240.100 Ezrin/radixin/moesin family Updated: 2019-01-29 Owner: ChiTaRS	NF2 A0A024R1D9 A0A024R1F6 A0A024R1I0 A0A024R1J8 A0A024R1J9 A0A286SD19 A0A286SD20 A0A286SD34 A5A158 P35240 Q16230 Q16231 Q16232 Q16233 Q16276 Q7KZ66 Q9NRW8 NM_181832.2	1..158 99.4%	+ 22	NF2 A0A024R1D9 A0A024R1F6 A0A024R1I0 A0A024R1J8 A0A024R1J9 A0A286SD19 A0A286SD20 A0A286SD34 A5A158 P35240 Q16230 Q16231 Q16232 Q16233 Q16276 Q7KZ66 Q9NRW8 NM_181832.2	149..675 98.7%	- 22	1 0 0	exon-exon
Homo Sapiens	EC532261 ANNOTATION OF CHIMERA FUSION GenBank ID: EC532261 FASTA Head Gene (1) Alignment: NF2 | OMIM: 607379 Tail Gene (2) Alignment: FOLH1 | OMIM: 600934 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4771 22 + 29611778 29612097 0 0 oncogene, tumor suppressor 2346 11 + 49181129 49181213 0 0 protein-coding 92 hg38 Updated: 2019-04-05 Owner: ChiTaRS	NF2 A0A024R1D9 A0A024R1F6 A0A024R1I0 A0A024R1J8 A0A024R1J9 A0A286SD19 A0A286SD20 A0A286SD34 A5A158 P35240 Q16230 Q16231 Q16232 Q16233 Q16276 Q7KZ66 Q9NRW8 NM_016418.5	1..76 96.0%	+ 22	FOLH1 E9PI29 E9PKM3 E9PLV0 E9PMK6 Q04609 Q2VPJ0 XM_017017434.1	8..91 96.4%	+ 11	1 0 0	intron-intron
Homo Sapiens	AA420653 ANNOTATION OF CHIMERA FUSION GenBank ID: AA420653 FASTA Head Gene (1) Alignment: TGM4 | OMIM: 600585 Tail Gene (2) Alignment: NF2 | OMIM: 607379 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 7047 3 + 44914241 44914601 1 1 protein-coding 4771 22 + 29616741 29616761 0 0 oncogene, tumor suppressor 388 hg38 Updated: 2019-04-13 Owner: ChiTaRS	TGM4 B4YUQ1 B4YUQ2 B4YUQ3 F8WCU8 O75320 P49221 Q9UBL5 XM_011534042.2	9..369 97.6%	+ 3	NF2 A0A024R1D9 A0A024R1F6 A0A024R1I0 A0A024R1J8 A0A024R1J9 A0A286SD19 A0A286SD20 A0A286SD34 A5A158 P35240 Q16230 Q16231 Q16232 Q16233 Q16276 Q7KZ66 Q9NRW8 NM_016418.5	361..381 100.0%	+ 22	1 0 0	exon-intron
Homo Sapiens	AI824686 ANNOTATION OF CHIMERA FUSION GenBank ID: AI824686 FASTA Head Gene (1) Alignment: CDKL3 | OMIM: 608459 Tail Gene (2) Alignment: NF2 | OMIM: 607379 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 51265 5 - 134285845 134354949 11 0 protein-coding 4771 22 + 29650848 29651015 0 0 oncogene, tumor suppressor 193 hg38 Updated: 2019-04-13 Owner: ChiTaRS	CDKL3 B4DX41 E5RFT9 E5RGK4 E5RI54 E7ET86 H0YAP8 H0YB17 Q8IVW4 XM_024446087.1	1..113 95.5%	- 5	NF2 A0A024R1D9 A0A024R1F6 A0A024R1I0 A0A024R1J8 A0A024R1J9 A0A286SD19 A0A286SD20 A0A286SD34 A5A158 P35240 Q16230 Q16231 Q16232 Q16233 Q16276 Q7KZ66 Q9NRW8 NM_016418.5	62..145 96.6%	+ 22	1 0 0	intron-intron
Homo Sapiens	AI082468 ANNOTATION OF CHIMERA FUSION GenBank ID: AI082468 FASTA Head Gene (1) Alignment: NF2 | OMIM: 607379 Tail Gene (2) Alignment: IGL Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4771 22 - 29649136 29649544 4 0 oncogene, tumor suppressor 3535 22 + 22547701 22548186 0 0 oncogene 501 hg38 Updated: 2019-02-17 Owner: ChiTaRS	NF2 A0A024R1D9 A0A024R1F6 A0A024R1I0 A0A024R1J8 A0A024R1J9 A0A286SD19 A0A286SD20 A0A286SD34 A5A158 P35240 Q16230 Q16231 Q16232 Q16233 Q16276 Q7KZ66 Q9NRW8 NM_181832.2	1..25 100.0%	- 22	IGL Q567P1 Q5FWF9 Q6GMW3 Q6GMW4 Q6GMX3 Q6GMX4 Q6IN99 Q6IPQ0 Q6NS95 Q6PIK1 Q6PIQ7 Q6PJR7 Q8N355 Q8N5F4	15..501 99.4%	+ 22	1 0 0	intron-intron
Homo Sapiens	BC071653 ANNOTATION OF CHIMERA FUSION GenBank ID: BC071653 FASTA Head Gene (1) Alignment: FBXO10 | OMIM: 609092 Tail Gene (2) Alignment: NF2 | OMIM: 607379 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 26267 9 - 37535717 37536178 9 0 protein-coding 4771 22 + 29697822 29698600 1 1 oncogene, tumor suppressor 1253 hg38 Updated: 2019-02-20 Owner: ChiTaRS	FBXO10 F5GXN9 J3KN78 Q9UK96 XM_006716754.4	1..462 99.8%	- 9	NF2 A0A024R1D9 A0A024R1F6 A0A024R1I0 A0A024R1J8 A0A024R1J9 A0A286SD19 A0A286SD20 A0A286SD34 A5A158 P35240 Q16230 Q16231 Q16232 Q16233 Q16276 Q7KZ66 Q9NRW8 NM_181832.2	458..1236 100.0%	+ 22	1 0 0	intron-exon
Homo Sapiens	BF687576 ANNOTATION OF CHIMERA FUSION GenBank ID: BF687576 FASTA Head Gene (1) Alignment: NF2 | OMIM: 607379 Tail Gene (2) Alignment: MTMR3 | OMIM: 603558 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4771 22 + 29649420 29649585 4 0 oncogene, tumor suppressor 8897 22 + 29982217 29982243 17 0 oncogene 505 hg38 Updated: 2019-01-09 Owner: ChiTaRS	NF2 A0A024R1D9 A0A024R1F6 A0A024R1I0 A0A024R1J8 A0A024R1J9 A0A286SD19 A0A286SD20 A0A286SD34 A5A158 P35240 Q16230 Q16231 Q16232 Q16233 Q16276 Q7KZ66 Q9NRW8 NM_181832.2	1..153 95.6%	+ 22	MTMR3 A0A024R1I2 A7E2W2 C9JLU3 G5E953 Q13615 XM_005261803.2	154..180 95.6%	+ 22	1 0 0	intron-intron	2HiC Hi-C contacts of chimeric junction Fusion Gene1 chromosome1 junction start1 junction end1 Hi-C point1 Δ1 Gene2 chromosome2 junction start2 junction end2 Hi-C point2 Δ2 Cell lines (Cellosaurus ID) 2 3 19 - - 32 - 8 25 - - 33 - 34 BF687576 NF2 22 29649584 29649585 29644011 5573 MTMR3 22 29982217 29982218 29984011 1793 GM12878 (CVCL_7526) BF687576 NF2 22 29649584 29649585 29654011 4426 MTMR3 22 29982217 29982218 29984011 1793 GM12878 (CVCL_7526)
Homo Sapiens	EC526677 ANNOTATION OF CHIMERA FUSION GenBank ID: EC526677 FASTA Head Gene (1) Alignment: CTBP1 | OMIM: 602618 Tail Gene (2) Alignment: NF2 | OMIM: 607379 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 1487 4 - 1220116 1220197 0 0 protein-coding 4771 22 - 29666885 29666951 0 0 oncogene, tumor suppressor 88 hg38 Updated: 2019-04-05 Owner: ChiTaRS	CTBP1 A0A0D9SGE6 D6RAX2 E7EPF8 E7ESU7 E7EUB3 E9PGB1 H0Y8U5 H0Y8W7 H0Y913 H0Y9M9 Q13363 Q4KMQ8 Q6IP95 X5D315 X5D7T7 X5D8Y5 X5DRG9 XM_017007767.2	6..84 98.8%	- 4	NF2 A0A024R1D9 A0A024R1F6 A0A024R1I0 A0A024R1J8 A0A024R1J9 A0A286SD19 A0A286SD20 A0A286SD34 A5A158 P35240 Q16230 Q16231 Q16232 Q16233 Q16276 Q7KZ66 Q9NRW8 NM_016418.5	24..88 95.4%	- 22	1 0 0	intron-intron
Homo Sapiens	DL055603 ANNOTATION OF CHIMERA FUSION GenBank ID: DL055603 FASTA Head Gene (1) Alignment: THOC5 | OMIM: 612733 Tail Gene (2) Alignment: NF2 | OMIM: 607379 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 8563 22 + 29513594 29522979 8 0 oncogene 4771 22 + 29648110 29648158 13 0 oncogene, tumor suppressor 148 hg38 Updated: 2019-01-29 Owner: ChiTaRS	THOC5 C9JCL9 C9JXG5 C9JXU6 F5GZF3 F8WCP5 F8WES8 H7C072 H7C441 Q13769 XM_005261798.1	17..89 95.0%	+ 22	NF2 A0A024R1D9 A0A024R1F6 A0A024R1I0 A0A024R1J8 A0A024R1J9 A0A286SD19 A0A286SD20 A0A286SD34 A5A158 P35240 Q16230 Q16231 Q16232 Q16233 Q16276 Q7KZ66 Q9NRW8 NM_181832.2	90..135 95.0%	+ 22	1 0 0	intron-intron

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