Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'NEK11'

Total of fusion sequences: 5 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Mus musculus
NM_010591.2
1..1663
100.0%
-
4

NM_172461.3
1661..1693
100.0%
+
9
1
0
0
exon-intron
Mus musculus
NM_013846.3
44..543
98.8%
-
13

NM_172461.3
540..571
100.0%
+
9
1
0
0
intron-intron
Homo Sapiens 200..219
100.0%
+
3
214..281
95.6%
-
7
1
0
0
exon-exon
Homo Sapiens
XR_001737372.1
51..144
100.0%
+
1

XR_001740271.1
141..236
100.0%
+
3
1
0
0
intron-intron
Homo Sapiens
XM_011511097.3
72..222
96.0%
-
2

XM_024453758.1
192..225
97.1%
-
3
1
0
0
intron-intron

T o p