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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'NARS'

Total of fusion sequences: 30 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism Fusion:
Graphical View,
Annotation,
PPI network 		Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y) 		Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences		 Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript		 Start1..End1
Ident1% 		Strand1
Chrom1 		Name(s)2,
transcript		 Start2..End2
Ident2% 		Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens		SplGraphs

ANNOTATION OF CHIMERA FUSION

GenBank ID: BP424521 FASTA
Head Gene (1) Alignment: BRINP3 Tail Gene (2) Alignment: NARS1 | OMIM: 108410 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
3394791-19020047719020080620protein-coding467718-5760663157607185101protein-coding 502 hg38
Updated: 2019-02-23
Owner: ChiTaRS
XM_017001125.1		1..330
99.4%		-
1
NM_004539.3		330..502
100.0%		-
18		1
0
0		intron-exon
2
Homo Sapiens		 ChimerDB

ANNOTATION OF CHIMERA FUSION

GenBank ID: BM748844 FASTA
Head Gene (1) Alignment: RNR2 Tail Gene (2) Alignment: NARS1 | OMIM: 108410 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
4550MT+1981242700rRNA467718-576217605762184911protein-coding 549 hg38
Updated: 2019-02-17
Owner: ChiTaRS
RNR2
Q8IVG9
14..461
99.4%		+
MT
NM_004539.3		461..549
100.0%		-
18		1
0
0		intron-exonHS110
3
Homo Sapiens		 ChimerDB

ANNOTATION OF CHIMERA FUSION

GenBank ID: AW602542 FASTA
Head Gene (1) Alignment: NARS1 | OMIM: 108410 Tail Gene (2) Alignment: PVT1 | OMIM: 165140 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
467718-576023925760282831protein-coding58208+12789794112789806570oncogene,
ncRNA		 231 hg38
Updated: 2019-02-20
Owner: ChiTaRS
NM_004539.3		5..116
100.0%		-
18		 PVT1
NR_003367.3		106..230
100.0%		+
8		1
0
0		exon-intron
4
Homo Sapiens		 ChimerDB

ANNOTATION OF CHIMERA FUSION

GenBank ID: BE073927 FASTA
Head Gene (1) Alignment: NARS1 | OMIM: 108410 Tail Gene (2) Alignment: PVT1 | OMIM: 165140 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
467718-576023925760282831protein-coding58208+12789794112789806570oncogene,
ncRNA		 242 hg38
Updated: 2019-02-20
Owner: ChiTaRS
NM_004539.3		16..127
100.0%		-
18		 PVT1
NR_003367.3		117..241
100.0%		+
8		1
0
0		exon-intron
5
Mus musculus		SplGraphs

ANNOTATION OF CHIMERA FUSION

GenBank ID: BE952123 FASTA
Head Gene (1) Alignment: Nars Tail Gene (2) Alignment: Abtb2 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
7022318-645164166451650511protein-coding993822+10361860410361908900protein-coding 755 mm10
Updated: 2019-05-28
Owner: ChiTaRS
NM_027350.3		187..276
100.0%		-
18
NM_178890.3		272..755
99.8%		+
2		1
0
0		exon-intron
6
Mus musculus

ANNOTATION OF CHIMERA FUSION

GenBank ID: BC052849 FASTA
UniProtKB: Q8BP47 Asparagine--tRNA ligase, cytoplasmic (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
Fusion Gene(s): Nars
Head Gene (1) Alignment: Nars Tail Gene (2) Alignment: 1700030N03Rik Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
7022318-6449965564516504151protein-coding7001119-3170003317004300 2616 mm10
Updated: 2019-06-15
Owner: ChiTaRS
NM_027350.3		12..2600
100.0%		-
18		 1700030N03Rik
NR_045304.1		2577..2616
96.7%		-
19		1
0
0		exon-intron
7
Mus musculus

ANNOTATION OF CHIMERA FUSION

GenBank ID: DV058998 FASTA
Head Gene (1) Alignment: Nars Tail Gene (2) Alignment: Adamts9 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
7022318-645116526451653651protein-coding1014016-928204809282087900 1011 mm10
Updated: 2019-06-16
Owner: ChiTaRS
NM_027350.3		32..419
100.0%		-
18
XM_006505260.3		411..470
97.5%		-
6		1
0
0		exon-intron
8
Mus musculus

ANNOTATION OF CHIMERA FUSION

GenBank ID: AW742636 FASTA
Head Gene (1) Alignment: Nars Tail Gene (2) Alignment: Fkrp Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
7022318-645160466451607800protein-coding2438537+168103181681082511protein-coding 525 mm10
Updated: 2019-06-16
Owner: ChiTaRS
NM_027350.3		3..31
100.0%		-
18
XM_011250562.1		22..525
99.3%		+
7		1
0
0		intron-exon
9
Homo Sapiens

ANNOTATION OF CHIMERA FUSION

GenBank ID: CB047914 FASTA
Head Gene (1) Alignment: IGSF5 | OMIM: 610638 Tail Gene (2) Alignment: NARS1 | OMIM: 108410 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
15008421+397875533978757300protein-coding467718+576015805760178611protein-coding 262 hg38
Updated: 2019-04-13
Owner: ChiTaRS
XM_011529472.2		8..28
100.0%		+
21
XM_005266700.2		26..232
100.0%		+
18		1
0
0		intron-exon
10
Mus musculus

ANNOTATION OF CHIMERA FUSION

GenBank ID: BF659665 FASTA
Head Gene (1) Alignment: Sgsm2 Tail Gene (2) Alignment: Nars Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
9776111+748799267487994800protein-coding7022318+644996496450015811protein-coding 519 mm10
Updated: 2019-06-14
Owner: ChiTaRS
Sgsm2
Q80U12
XM_006534581.3		1..23
100.0%		+
11
NM_027350.3		8..519
98.1%		+
18		1
0
0		intron-exon

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