Result for the search of Gene Name/NCBI ID(s): 'NARS'

Total of fusion sequences: 14 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Homo Sapiens	SplGraphs BP424521 ANNOTATION OF CHIMERA FUSION GenBank ID: BP424521 FASTA Head Gene (1) Alignment: BRINP3 Tail Gene (2) Alignment: NARS1 | OMIM: 108410 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 339479 1 - 190200477 190200806 2 0 protein-coding 4677 18 - 57606631 57607185 10 1 protein-coding 502 hg38 Updated: 2019-02-23 Owner: ChiTaRS	BRINP3 A0A0J9YVN8 B1AMP1 Q76B58 XM_017001125.1	1..330 99.4%	- 1	NARS1 K7EIU7 K7EJ19 K7EMQ6 K7ENF0 K7EPK2 K7EQ35 O43776 NM_004539.3	330..502 100.0%	- 18	1 0 0	intron-exon
2 Homo Sapiens	ChimerDB BM748844 ANNOTATION OF CHIMERA FUSION GenBank ID: BM748844 FASTA Head Gene (1) Alignment: RNR2 Tail Gene (2) Alignment: NARS1 | OMIM: 108410 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4550 MT + 1981 2427 0 0 rRNA 4677 18 - 57621760 57621849 1 1 protein-coding 549 hg38 Updated: 2019-02-17 Owner: ChiTaRS	RNR2 Q8IVG9	14..461 99.4%	+ MT	NARS1 K7EIU7 K7EJ19 K7EMQ6 K7ENF0 K7EPK2 K7EQ35 O43776 NM_004539.3	461..549 100.0%	- 18	1 0 0	intron-exon	HS110
3 Homo Sapiens	ChimerDB AW602542 ANNOTATION OF CHIMERA FUSION GenBank ID: AW602542 FASTA Head Gene (1) Alignment: NARS1 | OMIM: 108410 Tail Gene (2) Alignment: PVT1 | OMIM: 165140 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4677 18 - 57602392 57602828 3 1 protein-coding 5820 8 + 127897941 127898065 7 0 oncogene, ncRNA 231 hg38 Updated: 2019-02-20 Owner: ChiTaRS	NARS1 K7EIU7 K7EJ19 K7EMQ6 K7ENF0 K7EPK2 K7EQ35 O43776 NM_004539.3	5..116 100.0%	- 18	PVT1 NR_003367.3	106..230 100.0%	+ 8	1 0 0	exon-intron
4 Homo Sapiens	ChimerDB BE073927 ANNOTATION OF CHIMERA FUSION GenBank ID: BE073927 FASTA Head Gene (1) Alignment: NARS1 | OMIM: 108410 Tail Gene (2) Alignment: PVT1 | OMIM: 165140 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4677 18 - 57602392 57602828 3 1 protein-coding 5820 8 + 127897941 127898065 7 0 oncogene, ncRNA 242 hg38 Updated: 2019-02-20 Owner: ChiTaRS	NARS1 K7EIU7 K7EJ19 K7EMQ6 K7ENF0 K7EPK2 K7EQ35 O43776 NM_004539.3	16..127 100.0%	- 18	PVT1 NR_003367.3	117..241 100.0%	+ 8	1 0 0	exon-intron
5 Homo Sapiens	CB047914 ANNOTATION OF CHIMERA FUSION GenBank ID: CB047914 FASTA Head Gene (1) Alignment: IGSF5 | OMIM: 610638 Tail Gene (2) Alignment: NARS1 | OMIM: 108410 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 150084 21 + 39787553 39787573 0 0 protein-coding 4677 18 + 57601580 57601786 1 1 protein-coding 262 hg38 Updated: 2019-04-13 Owner: ChiTaRS	IGSF5 L8E8K9 Q9NSI5 XM_011529472.2	8..28 100.0%	+ 21	NARS1 K7EIU7 K7EJ19 K7EMQ6 K7ENF0 K7EPK2 K7EQ35 O43776 XM_005266700.2	26..232 100.0%	+ 18	1 0 0	intron-exon
6 Homo Sapiens	AW380044 ANNOTATION OF CHIMERA FUSION GenBank ID: AW380044 FASTA Head Gene (1) Alignment: CHD3 | OMIM: 602120 Tail Gene (2) Alignment: NARS1 | OMIM: 108410 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 1107 17 - 7897217 7899111 15 1 oncogene, protein-coding 4677 18 + 57602884 57606639 12 1 protein-coding 605 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Nop53 (PF07767, IPR011687) 383 3 87 3.2e-05 9.500 Nop53 (60S ribosomal biogenesis) PRP38_assoc (PF12871, IPR024767) 99 5 69 0.059 0.300 Pre-mRNA-splicing factor 38-associated hydrophilic C-term Mito_fiss_reg (PF05308, IPR007972) 244 32 134 7.7e-06 12.200 Mitochondrial fission regulator DUF1777 (PF08648, IPR013957) 171 93 205 0.0013 5.100 Protein of unknown function (DUF1777) CHDNT (PF08073, IPR012958) 54 207 260 1.6e-30 91.200 CHDNT (NUC034) domain Ribosomal_60s (PF00428, IPR001813) 88 240 291 0.0033 4.300 60s Acidic ribosomal protein SMN (PF06003, IPR010304) 264 253 312 0.00055 5.300 Survival motor neuron protein (SMN) RNA_pol_3_Rpc31 (PF11705, IPR024661) 230 400 517 0.00062 6.100 DNA-directed RNA polymerase III subunit Rpc31 PHD (PF00628, IPR019787, SM00249) 52 440 485 4.5e-15 41.700 PHD-finger Chromo (PF00385, IPR023780, SM00298) 55 598 635 3.2e-08 19.700 Chromo (CHRromatin Organisation MOdifier) domain tRNA-synt_2 (PF00152, IPR004364) 314 975 1148 7e-51 159.200 tRNA synthetases class II (D, K and N) Updated: 2019-02-20 Owner: ChiTaRS	CHD3 H7C0J3 H7C2H0 H7C3H7 I3L1I4 I3L229 K7EPV1 Q12873 Q2TAZ1 XM_017024066.1	7..412 99.6%	- 17	NARS1 K7EIU7 K7EJ19 K7EMQ6 K7ENF0 K7EPK2 K7EQ35 O43776 NM_004539.3	408..605 99.0%	+ 18	1 0 0	exon-exon
7 Homo Sapiens	DN919307 ANNOTATION OF CHIMERA FUSION GenBank ID: DN919307 FASTA Head Gene (1) Alignment: NARS1 | OMIM: 108410 Tail Gene (2) Alignment: NTNG1 | OMIM: 608818 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4677 18 - 57611639 57621783 14 1 protein-coding 22854 1 + 107455749 107455768 1 0 protein-coding 572 hg38 Updated: 2019-02-17 Owner: ChiTaRS	NARS1 K7EIU7 K7EJ19 K7EMQ6 K7ENF0 K7EPK2 K7EQ35 O43776 NM_004539.3	1..552 99.5%	- 18	NTNG1 Q5ICN7 Q5IEC1 Q5IEC2 Q5IEC3 Q5IEC4 Q5IEC5 Q5IEC6 Q5IEC7 Q9Y2I2 X5DNW2 XM_017000683.2	551..570 100.0%	+ 1	1 0 0	exon-intron
8 Homo Sapiens	CB054558 ANNOTATION OF CHIMERA FUSION GenBank ID: CB054558 FASTA Head Gene (1) Alignment: ATP6V1E1 | OMIM: 108746 Tail Gene (2) Alignment: NARS1 | OMIM: 108410 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 529 22 - 17616677 17616704 7 0 protein-coding 4677 18 + 57600656 57601262 14 1 protein-coding 643 hg38 Updated: 2019-01-09 Owner: ChiTaRS	ATP6V1E1 C9J8H1 P36543 Q53Y06 NM_001696.3	12..39 96.5%	- 22	NARS1 K7EIU7 K7EJ19 K7EMQ6 K7ENF0 K7EPK2 K7EQ35 O43776 NM_004539.3	37..643 100.0%	+ 18	1 0 0	intron-exon
9 Homo Sapiens	BP278883 ANNOTATION OF CHIMERA FUSION GenBank ID: BP278883 FASTA Head Gene (1) Alignment: NARS1 | OMIM: 108410 Tail Gene (2) Alignment: AC020743.2 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4677 18 - 57613601 57621800 14 1 protein-coding 4294900442 7 - 50229334 50229355 0 0 587 hg38 Updated: 2019-01-05 Owner: ChiTaRS	NARS1 K7EIU7 K7EJ19 K7EMQ6 K7ENF0 K7EPK2 K7EQ35 O43776 NM_004539.3	1..505 100.0%	- 18	AC020743.2	502..523 100.0%	- 7	1 0 0	exon-intron
10 Homo Sapiens	EC560524 ANNOTATION OF CHIMERA FUSION GenBank ID: EC560524 FASTA Head Gene (1) Alignment: NRXN3 | OMIM: 600567 Tail Gene (2) Alignment: NARS1 | OMIM: 108410 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 9369 14 - 79134127 79134147 0 0 protein-coding 4677 18 - 57600876 57600995 1 1 protein-coding 136 hg38 Updated: 2019-03-25 Owner: ChiTaRS	NRXN3 A0A0A0MR89 A0A0C4DGK4 A0A0U1RQC5 A0A0U1RRJ0 G3V247 G3V4R9 H0YJL2 Q9HDB5 Q9Y4C0 XM_011537364.2	2..22 100.0%	- 14	NARS1 K7EIU7 K7EJ19 K7EMQ6 K7ENF0 K7EPK2 K7EQ35 O43776 XM_005266700.2	15..136 96.7%	- 18	1 0 0	intron-exon

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