Search Database Collection

Result for the search: Gene Name/NCBI ID(s): 'NARS'

Total of fusion sequences: 9 (from 1,350,599 parsed EST/mRNAs. Last update 2019-06-16)

Organism	Fusion: Graphical View, Annotation, PPI	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed, iHOP reference
		Name(s)1	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,17	8	9,10,11	12,25	13,14,15	16	17
Homo Sapiens	SplGraphs BP424521 ANNOTATION OF CHIMERA FUSION GenBank ID: BP424521 FASTA Head Gene (1) Alignment: BRINP3 Tail Gene (2) Alignment: NARS | OMIM: 108410 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 339479 1 - 190169607 190169936 NA NA protein-coding 4677 18 - 55273863 55274417 NA NA protein-coding NA hg19 Updated: 2012-12-12 Owner: ChiTaRS	BRINP3 A0A0J9YVN8 B1AMP1 Q76B58	1..330 99.4%	- 1	NARS K7EIU7 K7EJ19 K7EMQ6 K7ENF0 K7EPK2 K7EQ35 O43776	330..502 100.0%	- 18	1 0 0
Homo Sapiens	ChimerDB BM748844 ANNOTATION OF CHIMERA FUSION GenBank ID: BM748844 FASTA Head Gene (1) Alignment: MT-RNR2 Tail Gene (2) Alignment: NARS | OMIM: 108410 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4550 MT + 1983 2429 NA NA rRNA 4677 18 - 55288992 55289081 NA NA protein-coding NA hg19 Updated: 2012-12-12 Owner: ChiTaRS	MT-RNR2 Q8IVG9	14..461 99.2%	+ MT	NARS K7EIU7 K7EJ19 K7EMQ6 K7ENF0 K7EPK2 K7EQ35 O43776	461..549 100.0%	- 18	1 0 0	HS110
Homo Sapiens	ChimerDB AW602542 ANNOTATION OF CHIMERA FUSION GenBank ID: AW602542 FASTA Head Gene (1) Alignment: NARS | OMIM: 108410 Tail Gene (2) Alignment: PVT1 | OMIM: 165140 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4677 18 - 55269624 55270060 NA NA protein-coding 5820 8 + 128910187 128910311 NA NA oncogene NA hg19 Updated: 2012-12-12 Owner: ChiTaRS	NARS K7EIU7 K7EJ19 K7EMQ6 K7ENF0 K7EPK2 K7EQ35 O43776	5..116 100.0%	- 18	PVT1	106..230 100.0%	+ 8	1 0 0
Homo Sapiens	ChimerDB BE073927 ANNOTATION OF CHIMERA FUSION GenBank ID: BE073927 FASTA Head Gene (1) Alignment: NARS | OMIM: 108410 Tail Gene (2) Alignment: PVT1 | OMIM: 165140 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4677 18 - 55269624 55270060 NA NA protein-coding 5820 8 + 128910187 128910311 NA NA oncogene NA hg19 Updated: 2012-12-12 Owner: ChiTaRS	NARS K7EIU7 K7EJ19 K7EMQ6 K7ENF0 K7EPK2 K7EQ35 O43776	16..127 100.0%	- 18	PVT1	117..241 100.0%	+ 8	1 0 0
Homo Sapiens	AW380044 ANNOTATION OF CHIMERA FUSION GenBank ID: AW380044 FASTA Head Gene (1) Alignment: CHD3 | OMIM: 602120 Tail Gene (2) Alignment: NARS | OMIM: 108410 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 1107 17 - 7800535 7802429 NA NA oncogene 4677 18 + 55270116 55273203 NA NA protein-coding NA hg19 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Nop53 (PF07767, IPR011687) 383 3 87 3.2e-05 9.500 Nop53 (60S ribosomal biogenesis) PRP38_assoc (PF12871, IPR024767) 99 5 69 0.059 0.300 Pre-mRNA-splicing factor 38-associated hydrophilic C-term Mito_fiss_reg (PF05308, IPR007972) 244 32 134 7.7e-06 12.200 Mitochondrial fission regulator DUF1777 (PF08648, IPR013957) 171 93 205 0.0013 5.100 Protein of unknown function (DUF1777) CHDNT (PF08073, IPR012958) 54 207 260 1.6e-30 91.200 CHDNT (NUC034) domain Ribosomal_60s (PF00428, IPR001813) 88 240 291 0.0033 4.300 60s Acidic ribosomal protein SMN (PF06003, IPR010304) 264 253 312 0.00055 5.300 Survival motor neuron protein (SMN) RNA_pol_3_Rpc31 (PF11705, IPR024661) 230 400 517 0.00062 6.100 DNA-directed RNA polymerase III subunit Rpc31 PHD (PF00628, IPR019787, SM00249) 52 440 485 4.5e-15 41.700 PHD-finger Chromo (PF00385, IPR023780, SM00298) 55 598 635 3.2e-08 19.700 Chromo (CHRromatin Organisation MOdifier) domain tRNA-synt_2 (PF00152, IPR004364) 314 975 1148 7e-51 159.200 tRNA synthetases class II (D, K and N) Updated: 2012-12-12 Owner: ChiTaRS	CHD3 H7C0J3 H7C2H0 H7C3H7 I3L1I4 I3L229 K7EPV1 Q12873 Q2TAZ1	7..412 99.6%	- 17	NARS K7EIU7 K7EJ19 K7EMQ6 K7ENF0 K7EPK2 K7EQ35 O43776	408..582 99.5%	+ 18	1 0 0
Homo Sapiens	DN919307 ANNOTATION OF CHIMERA FUSION GenBank ID: DN919307 FASTA Head Gene (1) Alignment: NARS | OMIM: 108410 Tail Gene (2) Alignment: NTNG1 | OMIM: 608818 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4677 18 - 57611639 57621783 7 0 protein-coding 22854 1 + 107455749 107455768 1 0 protein-coding 572 hg38 Updated: 2018-05-18 Owner: ChiTaRS	NARS K7EIU7 K7EJ19 K7EMQ6 K7ENF0 K7EPK2 K7EQ35 O43776	1..552 99.5%	- 18	NTNG1 Q5ICN7 Q5IEC1 Q5IEC2 Q5IEC3 Q5IEC4 Q5IEC5 Q5IEC6 Q5IEC7 Q9Y2I2 X5DNW2	551..570 100.0%	+ 1	1 0 0
Homo Sapiens	AW887048 ANNOTATION OF CHIMERA FUSION GenBank ID: AW887048 FASTA Head Gene (1) Alignment: ZNF14 | OMIM: 194556 Tail Gene (2) Alignment: NARS | OMIM: 108410 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 7561 19 + 19843027 19843479 NA NA protein-coding 4677 18 - 55283954 55283996 NA NA protein-coding NA hg19 Updated: 2012-12-12 Owner: ChiTaRS	ZNF14 P17017	20..473 98.1%	+ 19	NARS K7EIU7 K7EJ19 K7EMQ6 K7ENF0 K7EPK2 K7EQ35 O43776	471..512 95.3%	- 18	1 0 0
Homo Sapiens	BE867051 ANNOTATION OF CHIMERA FUSION GenBank ID: BE867051 FASTA Head Gene (1) Alignment: NARS | OMIM: 108410 Tail Gene (2) Alignment: NARS | OMIM: 108410 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4677 18 + 55268287 55268376 NA NA protein-coding 4677 18 - 55267898 55268307 NA NA protein-coding NA hg19 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to tRNA_anti-codon (PF01336, IPR004365) 76 280 360 2.6e-14 39.400 OB-fold nucleic acid binding domain tRNA-synt_2 (PF00152, IPR004364) 314 377 695 8.9e-112 359.200 tRNA synthetases class II (D, K and N) Updated: 2012-12-12 Owner: ChiTaRS	NARS K7EIU7 K7EJ19 K7EMQ6 K7ENF0 K7EPK2 K7EQ35 O43776	1..90 100.0%	+ 18	NARS K7EIU7 K7EJ19 K7EMQ6 K7ENF0 K7EPK2 K7EQ35 O43776	86..492 100.0%	- 18	1 0 0
Homo Sapiens	AW993534 ANNOTATION OF CHIMERA FUSION GenBank ID: AW993534 FASTA Head Gene (1) Alignment: FKBP4 | OMIM: 600611 Tail Gene (2) Alignment: NARS | OMIM: 108410 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 2288 12 - 2912600 2912740 NA NA protein-coding 4677 18 - 55274765 55282904 NA NA protein-coding NA hg19 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to FKBP_C (PF00254, IPR001179) 94 105 197 1.6e-34 104.500 FKBP-type peptidyl-prolyl cis-trans isomerase TPR_1 (PF00515, IPR001440) 34 336 360 2.5e-06 13.600 Tetratricopeptide repeat OmpH (PF03938, IPR005632, SM00935) 156 396 521 1.2e-06 14.800 Outer membrane protein (OmpH-like) TPR_2 (PF07719, IPR013105) 34 415 448 3.1e-10 26.100 Tetratricopeptide repeat tRNA_anti-codon (PF01336, IPR004365) 76 695 775 2.7e-14 39.300 OB-fold nucleic acid binding domain tRNA-synt_2 (PF00152, IPR004364) 314 792 1110 1.8e-110 355.000 tRNA synthetases class II (D, K and N) Updated: 2012-12-12 Owner: ChiTaRS	FKBP4 A0A0F7G8H5 F5H120 F5H1U3 H0YFG2 H0YG86 Q02790	13..152 99.3%	- 12	NARS K7EIU7 K7EJ19 K7EMQ6 K7ENF0 K7EPK2 K7EQ35 O43776	143..544 99.1%	- 18	1 0 0