Result for the search of Gene Name/NCBI ID(s): 'NAP1L1'

Total of fusion sequences: 35 (from 1493742 parsed EST/mRNAs. Last update 2019-12-11 12:04:16)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Homo Sapiens	SplGraphs BF756411 ANNOTATION OF CHIMERA FUSION GenBank ID: BF756411 FASTA Head Gene (1) Alignment: EXOC7 | OMIM: 608163 Tail Gene (2) Alignment: NAP1L1 | OMIM: 164060 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 23265 17 - 76082825 76083031 1 1 protein-coding 4673 12 - 76053773 76056139 9 1 protein-coding 523 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to COG5 (PF10392, IPR019465) 132 29 118 2e-06 14.200 Golgi transport complex subunit 5 Exo70 (PF03081, IPR004140) 373 333 700 1.4e-81 260.500 Exo70 exocyst complex subunit NAP (PF00956, IPR002164) 268 976 1042 2.6e-20 58.800 Nucleosome assembly protein (NAP) Updated: 2019-02-20 Owner: ChiTaRS	EXOC7 A0A0A0MRE1 A0A0A0MSB8 B4DJ07 B5MCY9 C9JKC2 C9JME6 K7ENP8 K7ERQ5 Q5G0E1 Q96BU6 Q9UPT5 XM_024450669.1	12..213 97.6%	- 17	NAP1L1 A0A024RBB7 A0A024RBE6 B7Z4K9 B7Z9C2 F5H4R6 F8VRJ2 F8VUX1 F8VV59 F8VVB5 F8VXI6 F8VY35 F8W020 F8W0J6 F8W118 F8W543 H0YH88 H0YHC3 H0YIV4 P55209 XR_001748716.1	204..523 97.5%	- 12	1 0 0	exon-exon
2 Homo Sapiens	ChimerDB BF804799 ANNOTATION OF CHIMERA FUSION GenBank ID: BF804799 FASTA Head Gene (1) Alignment: EXOC7 | OMIM: 608163 Tail Gene (2) Alignment: NAP1L1 | OMIM: 164060 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 23265 17 - 76082825 76083029 1 1 protein-coding 4673 12 - 76053773 76056139 9 1 protein-coding 509 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to COG5 (PF10392, IPR019465) 132 29 118 2.1e-06 14.200 Golgi transport complex subunit 5 Exo70 (PF03081, IPR004140) 373 333 700 1.5e-81 260.400 Exo70 exocyst complex subunit Updated: 2019-02-20 Owner: ChiTaRS	EXOC7 A0A0A0MRE1 A0A0A0MSB8 B4DJ07 B5MCY9 C9JKC2 C9JME6 K7ENP8 K7ERQ5 Q5G0E1 Q96BU6 Q9UPT5 XM_024450669.1	12..203 95.7%	- 17	NAP1L1 A0A024RBB7 A0A024RBE6 B7Z4K9 B7Z9C2 F5H4R6 F8VRJ2 F8VUX1 F8VV59 F8VVB5 F8VXI6 F8VY35 F8W020 F8W0J6 F8W118 F8W543 H0YH88 H0YHC3 H0YIV4 P55209 XR_001748716.1	194..509 99.4%	- 12	1 0 0	exon-exon
3 Homo Sapiens	ChimerDB BF804803 ANNOTATION OF CHIMERA FUSION GenBank ID: BF804803 FASTA Head Gene (1) Alignment: EXOC7 | OMIM: 608163 Tail Gene (2) Alignment: NAP1L1 | OMIM: 164060 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 23265 17 - 76082825 76083007 1 1 protein-coding 4673 12 - 76053773 76056139 9 1 protein-coding 494 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to COG5 (PF10392, IPR019465) 132 29 118 2e-06 14.200 Golgi transport complex subunit 5 Exo70 (PF03081, IPR004140) 373 333 700 1.4e-81 260.500 Exo70 exocyst complex subunit Updated: 2019-02-20 Owner: ChiTaRS	EXOC7 A0A0A0MRE1 A0A0A0MSB8 B4DJ07 B5MCY9 C9JKC2 C9JME6 K7ENP8 K7ERQ5 Q5G0E1 Q96BU6 Q9UPT5 XM_024450669.1	7..188 97.8%	- 17	NAP1L1 A0A024RBB7 A0A024RBE6 B7Z4K9 B7Z9C2 F5H4R6 F8VRJ2 F8VUX1 F8VV59 F8VVB5 F8VXI6 F8VY35 F8W020 F8W0J6 F8W118 F8W543 H0YH88 H0YHC3 H0YIV4 P55209 XR_001748716.1	179..494 99.4%	- 12	1 0 0	exon-exon
4 Homo Sapiens	ChimerDB T05071 ANNOTATION OF CHIMERA FUSION GenBank ID: T05071 FASTA Head Gene (1) Alignment: NAP1L1 | OMIM: 164060 Tail Gene (2) Alignment: LDHAL6A Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4673 12 - 76055038 76056467 10 0 protein-coding 160287 11 - 18473239 18473427 4 0 protein-coding 378 hg38 Updated: 2019-02-23 Owner: ChiTaRS	NAP1L1 A0A024RBB7 A0A024RBE6 B7Z4K9 B7Z9C2 F5H4R6 F8VRJ2 F8VUX1 F8VV59 F8VVB5 F8VXI6 F8VY35 F8W020 F8W0J6 F8W118 F8W543 H0YH88 H0YHC3 H0YIV4 P55209 XR_001748716.1	1..188 98.4%	- 12	LDHAL6A A0A087WUM2 Q6ZMR3 Q96L19 XM_011519925.1	188..378 97.4%	- 11	1 0 0	intron-intron
5 Homo Sapiens	ChimerDB BF967465 ANNOTATION OF CHIMERA FUSION GenBank ID: BF967465 FASTA Head Gene (1) Alignment: DNAJB2 | OMIM: 604139 Tail Gene (2) Alignment: NAP1L1 | OMIM: 164060 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 3300 2 + 219279352 219282005 5 1 protein-coding 4673 12 - 76055032 76059850 8 1 protein-coding 754 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to NAP (PF00956, IPR002164) 268 220 384 6.4e-65 205.000 Nucleosome assembly protein (NAP) DNA_pol_phi (PF04931, IPR007015) 778 359 429 0.00062 4.000 DNA polymerase phi Updated: 2019-02-20 Owner: ChiTaRS	DNAJB2 C9J1G2 C9JRD2 C9JX00 C9JXB9 E7ETU0 P25686 NM_001039550.1	10..508 99.8%	+ 2	NAP1L1 A0A024RBB7 A0A024RBE6 B7Z4K9 B7Z9C2 F5H4R6 F8VRJ2 F8VUX1 F8VV59 F8VVB5 F8VXI6 F8VY35 F8W020 F8W0J6 F8W118 F8W543 H0YH88 H0YHC3 H0YIV4 P55209 XR_001748716.1	509..744 99.2%	- 12	1 0 0	exon-exon
6 Homo Sapiens	ChimerDB BF818583 ANNOTATION OF CHIMERA FUSION GenBank ID: BF818583 FASTA Head Gene (1) Alignment: NCL | OMIM: 164035 Tail Gene (2) Alignment: NAP1L1 | OMIM: 164060 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4691 2 - 231461735 231463248 13 1 protein-coding 4673 12 - 76053790 76059838 9 1 protein-coding 615 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to CENP-B_dimeris (PF09026, IPR015115) 100 133 174 0.0047 3.600 Centromere protein B dimerisation domain Herpes_BLLF1 (PF05109, IPR007796) 886 139 221 0.00027 5.000 Herpes virus major outer envelope glycoprotein (BLLF1) NAP (PF00956, IPR002164) 268 141 325 2.6e-36 111.200 Nucleosome assembly protein (NAP) SUIM_assoc (PF16619) 64 342 371 0.0035 3.800 Unstructured region C-term to UIM in Ataxin3 Updated: 2019-02-20 Owner: ChiTaRS	NCL A0A024R4A0 B3KM80 C9J1H7 C9JLB1 C9JWL1 C9JYW2 H7BY16 L8EAF1 P19338 NM_005381.2	22..265 96.3%	- 2	NAP1L1 A0A024RBB7 A0A024RBE6 B7Z4K9 B7Z9C2 F5H4R6 F8VRJ2 F8VUX1 F8VV59 F8VVB5 F8VXI6 F8VY35 F8W020 F8W0J6 F8W118 F8W543 H0YH88 H0YHC3 H0YIV4 P55209 XR_001748716.1	259..615 97.5%	- 12	1 0 0	exon-exon
7 Homo Sapiens	ChimerDB BQ960463 ANNOTATION OF CHIMERA FUSION GenBank ID: BQ960463 FASTA Head Gene (1) Alignment: ANP32BP1 Tail Gene (2) Alignment: NAP1L1 | OMIM: 164060 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 646791 15 + 75321687 75321856 1 1 pseudo 4673 12 + 76060137 76084661 5 1 protein-coding 979 hg38 Updated: 2019-02-21 Owner: ChiTaRS	ANP32BP1	1..169 95.3%	+ 15	NAP1L1 A0A024RBB7 A0A024RBE6 B7Z4K9 B7Z9C2 F5H4R6 F8VRJ2 F8VUX1 F8VV59 F8VVB5 F8VXI6 F8VY35 F8W020 F8W0J6 F8W118 F8W543 H0YH88 H0YHC3 H0YIV4 P55209 XR_001748716.1	167..630 100.0%	+ 12	1 0 0	exon-exon
8 Homo Sapiens	CA420158 ANNOTATION OF CHIMERA FUSION GenBank ID: CA420158 FASTA Head Gene (1) Alignment: NAP1L1 | OMIM: 164060 Tail Gene (2) Alignment: NAP1L1 | OMIM: 164060 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4673 12 + 76047600 76060246 12 1 protein-coding 4673 12 - 76055057 76059880 8 1 protein-coding 609 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to RRN3 (PF05327, IPR007991) 559 1 132 0.00087 3.900 RNA polymerase I specific transcription initiation factor RRN3 NAP (PF00956, IPR002164) 268 76 482 8.8e-113 362.000 Nucleosome assembly protein (NAP) DNA_pol_phi (PF04931, IPR007015) 778 460 527 0.0017 2.500 DNA polymerase phi Updated: 2019-02-21 Owner: ChiTaRS	NAP1L1 A0A024RBB7 A0A024RBE6 B7Z4K9 B7Z9C2 F5H4R6 F8VRJ2 F8VUX1 F8VV59 F8VVB5 F8VXI6 F8VY35 F8W020 F8W0J6 F8W118 F8W543 H0YH88 H0YHC3 H0YIV4 P55209 XR_001748716.1	15..443 97.7%	+ 12	NAP1L1 A0A024RBB7 A0A024RBE6 B7Z4K9 B7Z9C2 F5H4R6 F8VRJ2 F8VUX1 F8VV59 F8VVB5 F8VXI6 F8VY35 F8W020 F8W0J6 F8W118 F8W543 H0YH88 H0YHC3 H0YIV4 P55209 XR_001748716.1	444..609 99.4%	- 12	0 12707 212	exon-exon	3HiC Hi-C contacts of chimeric junction Fusion Gene1 chromo- some1 junction start1 junction end1 Hi-C point1 Δ1 Gene2 chromo- some2 junction start2 junction end2 Hi-C point2 Δ2 Cell lines (Cell_ID,) PubMed(,s) 2 3 19 - - 32 - 8 25 - - 33 - 34 - CA420158 NAP1L1 12 76060245 76060246 76056220 4025 NAP1L1 12 76055057 76055058 76046220 8837 GM12878 (CVCL_7526) 25497547 CA420158 NAP1L1 12 76060245 76060246 76056220 4025 NAP1L1 12 76055057 76055058 76056220 1162 GM12878 (CVCL_7526) 25497547 CA420158 NAP1L1 12 76060245 76060246 76066220 5974 NAP1L1 12 76055057 76055058 76056220 1162 K-562 (CVCL_0004) 25497547
9 Homo Sapiens	N75795 ANNOTATION OF CHIMERA FUSION GenBank ID: N75795 FASTA Head Gene (1) Alignment: NAP1L1 | OMIM: 164060 Tail Gene (2) Alignment: NAP1L1 | OMIM: 164060 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4673 12 + 76046202 76046369 1 1 protein-coding 4673 12 - 76046365 76046526 16 1 protein-coding 418 hg38 Updated: 2019-02-02 Owner: ChiTaRS	NAP1L1 A0A024RBB7 A0A024RBE6 B7Z4K9 B7Z9C2 F5H4R6 F8VRJ2 F8VUX1 F8VV59 F8VVB5 F8VXI6 F8VY35 F8W020 F8W0J6 F8W118 F8W543 H0YH88 H0YHC3 H0YIV4 P55209 XR_001748716.1	1..168 100.0%	+ 12	NAP1L1 A0A024RBB7 A0A024RBE6 B7Z4K9 B7Z9C2 F5H4R6 F8VRJ2 F8VUX1 F8VV59 F8VVB5 F8VXI6 F8VY35 F8W020 F8W0J6 F8W118 F8W543 H0YH88 H0YHC3 H0YIV4 P55209 XR_001748716.1	165..326 100.0%	- 12	0 647 1186	exon-exon	3HiC Hi-C contacts of chimeric junction Fusion Gene1 chromo- some1 junction start1 junction end1 Hi-C point1 Δ1 Gene2 chromo- some2 junction start2 junction end2 Hi-C point2 Δ2 Cell lines (Cell_ID,) PubMed(,s) 2 3 19 - - 32 - 8 25 - - 33 - 34 - N75795 NAP1L1 12 76046366 76046369 76046220 146 NAP1L1 12 76046365 76046368 76046220 145 GM12878 (CVCL_7526) 25497547 N75795 NAP1L1 12 76046366 76046369 76056220 9851 NAP1L1 12 76046365 76046368 76046220 145 GM12878 (CVCL_7526) 25497547 N75795 NAP1L1 12 76046366 76046369 76056220 9851 NAP1L1 12 76046365 76046368 76056220 9852 GM12878 (CVCL_7526) 25497547
10 Homo Sapiens	AI866991 ANNOTATION OF CHIMERA FUSION GenBank ID: AI866991 FASTA Head Gene (1) Alignment: NAP1L1 | OMIM: 164060 Tail Gene (2) Alignment: NAP1L1 | OMIM: 164060 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4673 12 + 76047385 76047550 1 1 protein-coding 4673 12 + 76046994 76047210 16 1 protein-coding 375 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to NAP (PF00956, IPR002164) 268 238 507 2.6e-113 363.700 Nucleosome assembly protein (NAP) RNA_pol_3_Rpc31 (PF11705, IPR024661) 230 399 544 0.0016 4.800 DNA-directed RNA polymerase III subunit Rpc31 Updated: 2019-02-20 Owner: ChiTaRS	NAP1L1 A0A024RBB7 A0A024RBE6 B7Z4K9 B7Z9C2 F5H4R6 F8VRJ2 F8VUX1 F8VV59 F8VVB5 F8VXI6 F8VY35 F8W020 F8W0J6 F8W118 F8W543 H0YH88 H0YHC3 H0YIV4 P55209 XR_001748716.1	1..165 100.0%	+ 12	NAP1L1 A0A024RBB7 A0A024RBE6 B7Z4K9 B7Z9C2 F5H4R6 F8VRJ2 F8VUX1 F8VV59 F8VVB5 F8VXI6 F8VY35 F8W020 F8W0J6 F8W118 F8W543 H0YH88 H0YHC3 H0YIV4 P55209 XR_001748716.1	159..375 100.0%	+ 12	2 37 3	exon-exon	3HiC Hi-C contacts of chimeric junction Fusion Gene1 chromo- some1 junction start1 junction end1 Hi-C point1 Δ1 Gene2 chromo- some2 junction start2 junction end2 Hi-C point2 Δ2 Cell lines (Cell_ID,) PubMed(,s) 2 3 19 - - 32 - 8 25 - - 33 - 34 - AI866991 NAP1L1 12 76047544 76047550 76046220 1324 NAP1L1 12 76046994 76047000 76046220 774 GM12878 (CVCL_7526) 25497547 AI866991 NAP1L1 12 76047544 76047550 76056220 8670 NAP1L1 12 76046994 76047000 76046220 774 GM12878 (CVCL_7526) 25497547 AI866991 NAP1L1 12 76047544 76047550 76056220 8670 NAP1L1 12 76046994 76047000 76056220 9220 GM12878 (CVCL_7526) 25497547

T o p