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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Mms22l'

Total of fusion sequences: 6 (from 6,491,097 parsed EST/mRNAs. Last update: 2020-08-30 12:24:27)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

NM_001004141.2
13..1911
99.9%
-
4

XR_001784113.1
1894..1936
100.0%
-
4
1
0
0
exon-intron
2
Mus musculus

XM_006500001.2
9..828
99.1%
+
2

XR_001784113.1
827..854
100.0%
+
4
1
0
0
exon-intron
3
Mus musculus

XR_001784113.1
1..495
100.0%
-
4

NM_022433.2
485..642
96.2%
-
7
1
0
0
exon-exon
4
Mus musculus

XR_001784113.1
26..184
100.0%
-
4
Sox12
Q04890

NM_011438.2
165..466
100.0%
-
2
1
0
0
exon-exon
5
Mus musculus
Gm16701
NR_037988.1
11..188
95.0%
+
1

XR_001784113.1
23..400
99.8%
-
4
1
0
0
intron-exon
6
Mus musculus

XM_006513027.2
25..3600
100.0%
-
10

XR_001784113.1
3519..3613
95.4%
-
4
1
0
0
exon-intron

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