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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'MYC'

Total of fusion sequences: 125 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism Fusion:
Graphical View,
Annotation,
PPI network 		Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y) 		Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences		 Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript		 Start1..End1
Ident1% 		Strand1
Chrom1 		Name(s)2,
transcript		 Start2..End2
Ident2% 		Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
81
Homo Sapiens

ANNOTATION OF CHIMERA FUSION

GenBank ID: AM287176 FASTA
UniProtKB: B3CJC6 V-myc myelocytomatosis viral oncogene homolog (Fragment)
Fusion Gene(s): MYC
Head Gene (1) Alignment: MYC | OMIM: 190080 Tail Gene (2) Alignment: IGHJ5 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
46098-12773672512773906020oncogene,
protein-coding		2847614-10586381010586411111 2636 hg38
Updated: 2019-01-29
Owner: ChiTaRS
NM_001354870.1		2..2337
99.7%		-
8		 2335..2636
97.7%		-
14		1
0
0		intron-exon
82
Homo Sapiens

ANNOTATION OF CHIMERA FUSION

GenBank ID: BC000141 FASTA
UniProtKB: P01106 Myc proto-oncogene protein (Class E basic helix-loop-helix protein 39) (bHLHe39) (Proto-oncogene c-Myc) (Transcription factor p64)
Fusion Gene(s): MYC BHLHE39
Head Gene (1) Alignment: MYC | OMIM: 190080 Tail Gene (2) Alignment: MAP4 | OMIM: 157132 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
46098+12773625812774142831oncogene,
protein-coding		41343-479316574793167650oncogene,
protein-coding		 2189 hg38
Updated: 2019-01-31
Owner: ChiTaRS
NM_001354870.1		1..2171
100.0%		+
8
XR_002959521.1		2168..2187
100.0%		-
3		1
0
0		exon-intron
83
Homo Sapiens

ANNOTATION OF CHIMERA FUSION

GenBank ID: AM287168 FASTA
UniProtKB: B3CJB1 V-myc myelocytomatosis viral oncogene homolog (Fragment)
Fusion Gene(s): MYC
UniProtKB: B3CJB2 V-myc myelocytomatosis viral oncogene homolog (Fragment)
Fusion Gene(s): MYC
Head Gene (1) Alignment: MYC | OMIM: 190080 Tail Gene (2) Alignment: LOC101927026 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
46098-12773613012773906020oncogene,
protein-coding		10192702616-9312783931280200ncRNA 3052 hg38
Updated: 2019-03-03
Owner: ChiTaRS
NM_002467.5		2..2931
99.7%		-
8		 LOC101927026
XR_001752073.1		2932..2951
100.0%		-
16		1
0
0		intron-intron
84
Homo Sapiens

ANNOTATION OF CHIMERA FUSION

GenBank ID: AM287162 FASTA
UniProtKB: B3CJA4 V-myc myelocytomatosis viral oncogene homolog (Fragment)
Fusion Gene(s): MYC
Head Gene (1) Alignment: MYC | OMIM: 190080 Tail Gene (2) Alignment: IGHV3-74 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
46098-12773661712773907520oncogene,
protein-coding		2840814-10681045910681069621 3207 hg38
Updated: 2019-01-29
Owner: ChiTaRS
NM_001354870.1		2..2295
96.8%		-
8		 IGHV3-74
A0A0B4J1X5
2288..2536
95.8%		-
14		1
0
0		intron-exon
85
Homo Sapiens

ANNOTATION OF CHIMERA FUSION

GenBank ID: K01909 FASTA
Head Gene (1) Alignment: MYC | OMIM: 190080 Tail Gene (2) Alignment: MYC | OMIM: 190080 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
46098+12773596612773673710oncogene,
protein-coding		46098+12773596512773673731oncogene,
protein-coding		 1631 hg38
Updated: 2019-01-31
Owner: ChiTaRS
NM_001354870.1		1..840
97.1%		+
8
NM_001354870.1		840..1631
97.7%		+
8		0
4481
5253		intron-exon
86
Homo Sapiens

ANNOTATION OF CHIMERA FUSION

GenBank ID: AW021464 FASTA
Head Gene (1) Alignment: MYC | OMIM: 190080 Tail Gene (2) Alignment: MYC | OMIM: 190080 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
46098-12774116012774121831oncogene,
protein-coding		46098+12774121912774142211oncogene,
protein-coding		 318 hg38

Domains of the full fusion Envelope E-value Score Description
name (Pfam, InterPro, SMART) length from to
Myc_N (PF01056, IPR012682) 332 191 535 7.4e-120 386.800 Myc amino-terminal region
HLH (PF00010, IPR011598, SM00353) 55 545 597 3.3e-18 51.800 Helix-loop-helix DNA-binding domain
Myc-LZ (PF02344, IPR003327) 31 598 628 1.5e-19 56.200 Myc leucine zipper domain
Updated: 2019-02-20
Owner: ChiTaRS
NM_001354870.1		8..66
100.0%		-
8
NM_001354870.1		59..262
99.6%		+
8		0
4481
5253		exon-exon
87
Homo Sapiens

ANNOTATION OF CHIMERA FUSION

GenBank ID: AB213413 FASTA
Head Gene (1) Alignment: MYC | OMIM: 190080 Tail Gene (2) Alignment: TSPOAP1-AS1 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
46098-12773819712773839021oncogene,
protein-coding		10050677917+583318815833218740ncRNA 490 hg38
Updated: 2019-02-20
Owner: ChiTaRS
NM_001354870.1		1..192
100.0%		-
8		 TSPOAP1-AS1
NR_038417.1		184..490
100.0%		+
17		0
1226
578		exon-intron
88
Homo Sapiens

ANNOTATION OF CHIMERA FUSION

GenBank ID: AB213412 FASTA
Head Gene (1) Alignment: MYC | OMIM: 190080 Tail Gene (2) Alignment: TSPOAP1-AS1 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
46098-12773761912773779210oncogene,
protein-coding		10050677917-583307395833096140ncRNA 393 hg38
Updated: 2019-02-20
Owner: ChiTaRS
NM_001354870.1		1..174
100.0%		-
8		 TSPOAP1-AS1
NR_038417.1		171..393
100.0%		-
17		0
527
1035		intron-intron
89
Homo Sapiens

ANNOTATION OF CHIMERA FUSION

GenBank ID: M31826 FASTA
Head Gene (1) Alignment: TSPOAP1-AS1 Tail Gene (2) Alignment: MYC | OMIM: 190080 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
10050677917-583312425833148820ncRNA46098+12773658412773701131oncogene,
protein-coding		 690 hg38
Updated: 2019-02-21
Owner: ChiTaRS
TSPOAP1-AS1
NR_038410.1		4..241
98.7%		-
17
NM_001354870.1		242..670
99.1%		+
8		0
527
1035		intron-exon
90
Homo Sapiens

ANNOTATION OF CHIMERA FUSION

GenBank ID: AJ630038 FASTA
Head Gene (1) Alignment: MYC | OMIM: 190080 Tail Gene (2) Alignment: MIR4537 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
46098-12773723812773730010oncogene,
protein-coding		10061642214-10585945510585964210ncRNA 250 hg38
Updated: 2019-01-29
Owner: ChiTaRS
NM_001354870.1		1..63
100.0%		-
8		 MIR4537 63..250
97.9%		-
14		0
96
1463		intron-intron

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