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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'MSN'

Total of fusion sequences: 16 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
XR_001745466.2
23..297
100.0%
-
8

XM_017029546.1
289..509
97.8%
+
X
1
0
0
intron-exon
2
Homo Sapiens
ChimerDB
XM_017029545.1
1..1368
100.0%
+
X

NM_004304.4
1369..1607
100.0%
-
2
0
0
65535
exon-exon BREAKPOINTs
3
Homo Sapiens
ChimerDB
XM_017029545.1
8..198
100.0%
-
X

XM_017000487.1
196..312
100.0%
-
1
1
0
0
exon-exon
4
Homo Sapiens

XM_017029545.1
3..381
100.0%
+
X

NM_004304.4
382..437
100.0%
-
2
2
72
416
intron-exon BREAKPOINTs
5
Homo Sapiens

XM_024452779.1
1..42
100.0%
-
2

XM_017029545.1
43..155
100.0%
+
X
2
72
416
exon-exon BREAKPOINTs
6
Homo Sapiens

XM_011537784.1
1..224
99.6%
-
12

XM_017029545.1
222..501
98.3%
+
X
1
0
0
intron-exon
7
Homo Sapiens

XR_001747138.1
1..24
100.0%
-
10

XM_017029545.1
19..337
98.8%
-
X
1
0
0
intron-exon
8
Homo Sapiens

NM_001083601.2
44..69
100.0%
-
16

XM_017029545.1
51..203
98.1%
-
X
1
0
0
intron-intron
9
Homo Sapiens

XM_017029546.1
25..224
99.5%
-
X

XM_017023540.2
218..616
98.5%
-
16
1
0
0
intron-intron
10
Homo Sapiens

NM_001329923.1
15..215
100.0%
+
19

XM_017029545.1
212..600
99.8%
-
X
1
0
0
exon-exon

T o p