Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'MEF2D'

Total of fusion sequences: 14 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens ChimerDB
XM_005245169.4
1..861
99.9%
-
1

NM_170711.2
859..1717
99.8%
+
19
3
97
0
exon-exonBREAKPOINTs
Homo Sapiens ChimerDB
NM_170711.2
1..513
100.0%
+
19

XM_005245169.4
511..1414
99.9%
-
1
3
0
0
exon-exonBREAKPOINTs
Homo Sapiens ChimerDB LZTS3
O60299

NM_001282533.1
1..300
100.0%
-
20

XM_005245169.4
297..427
98.5%
-
1
1
0
0
intron-exon
Homo Sapiens
XM_005245169.4
1..666
99.9%
-
1

NM_170711.2
664..1425
100.0%
+
19
3
97
0
exon-exonBREAKPOINTs
Homo Sapiens
NM_170711.2
1..464
100.0%
+
19

XM_005245169.4
462..1365
99.9%
-
1
3
0
0
exon-exonBREAKPOINTs
Homo Sapiens
NM_015260.3
1..32
100.0%
+
19

XM_005245169.4
33..374
98.3%
+
1
1
0
0
intron-exon
Homo Sapiens
XM_005245169.4
8..348
100.0%
-
1
LOC105371348
XR_933748.3
349..380
100.0%
-
16
1
0
0
exon-intron
Homo Sapiens
IGH
8..160
96.8%
+
14

XM_005245169.4
151..495
95.4%
+
1
1
0
0
intron-intron
Homo Sapiens
XM_005245169.4
1..487
99.4%
-
1

NM_020119.3
480..512
100.0%
+
7
1
0
0
exon-intron
Homo Sapiens
XM_005245169.4
6..126
100.0%
-
1

XM_011523896.3
113..220
96.3%
+
17
1
0
0
exon-intron

T o p