Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'MED1'

Total of fusion sequences: 16 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
D.Melanogaster
SplGraphs CG6420
Q9VBC4

NM_001300616.1
1..315
100.0%
-
3R

NM_141084.3
312..431
95.7%
-
3L
1
0
0
exon-exon
2
D.Melanogaster

NM_141084.3
1..338
99.8%
-
3L

NM_001275237.1
330..416
100.0%
+
3L
2
1
0
exon-exon
3
D.Melanogaster

NM_141084.3
1..338
99.8%
-
3L

NM_001275237.1
330..417
100.0%
+
3L
2
1
0
exon-exon
4
Homo Sapiens

NM_004774.3
14..80
100.0%
-
17

NM_001282396.1
68..304
96.1%
-
1
2
0
2
exon-exon
5
Homo Sapiens

NM_004774.3
2..68
100.0%
-
17

NM_001282396.1
56..291
96.1%
-
1
2
0
2
exon-exon
6
Homo Sapiens

XM_006721957.2
2..21
100.0%
-
17
RAB9B
Q9NP90

NR_146560.1
17..173
100.0%
-
X
1
0
0
intron-intron
7
Homo Sapiens
RP11-325B23.2 88..111
100.0%
-
3
94..118
100.0%
+
17
1
0
0
intron-intron
8
Homo Sapiens

XM_011528517.2
1..25
100.0%
+
20

NM_004774.3
10..543
100.0%
+
17
1
0
0
intron-exon
9
Mus musculus

XR_379408.1
67..126
98.0%
-
9

XM_006532505.2
108..411
99.4%
-
11
1
0
0
intron-exon
10
Homo Sapiens

NM_004774.3
37..449
100.0%
-
17

XM_017019090.1
433..454
100.0%
+
12
1
0
0
exon-intron

T o p