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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'MDM2'

Total of fusion sequences: 6 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens
NM_002392.5
1..83
100.0%
+
12
PVT1
NR_003367.3
83..203
100.0%
+
8
0
1
35178
exon-intron
Homo Sapiens
NM_002392.5
1..84
100.0%
+
12
PVT1
NR_003367.3
83..205
100.0%
+
8
0
1
35178
exon-intron
Homo Sapiens
NM_002392.5
1..228
98.9%
+
12

NR_135149.1
227..438
97.7%
-
3
1
0
0
exon-exon
Homo Sapiens
NM_002392.5
1..130
100.0%
+
12

NM_194315.1
130..305
100.0%
+
1
1
0
0
exon-exon
Homo Sapiens
NM_002392.5
1..214
98.9%
+
12

NR_073428.1
211..609
98.3%
-
17
1
0
0
exon-exon
Homo Sapiens
NM_001145337.2
16..217
99.6%
-
12

NM_007176.3
206..465
98.9%
+
14
1
0
0
intron-exon

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