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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'MATR3'

Total of fusion sequences: 20 (from 6,491,097 parsed EST/mRNAs. Last update: 2020-08-30 12:24:27)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NM_018834.5
1..57
100.0%
+
5

NM_002154.3
55..2507
100.0%
+
5
0
30410
0
exon-exon
2
Homo Sapiens
SplGraphs
NM_001257998.1
1..205
100.0%
+
7

NM_199189.2
203..578
100.0%
+
5
1
0
0
exon-exon
3
Homo Sapiens
ChimerDB
NM_199189.2
1..218
96.8%
+
5

XM_011536954.3
192..340
98.7%
-
14
0
65535
4
intron-intron
4
Homo Sapiens
ChimerDB
NM_199189.2
8..226
98.3%
+
5

XM_011536954.3
227..351
96.8%
-
14
0
65535
4
intron-intron
5
Homo Sapiens
ChimerDB
NM_018834.5
1..57
100.0%
+
5

NM_002154.3
55..547
100.0%
+
5
0
30410
0
exon-exon
6
Homo Sapiens
SNHG4 1..521
100.0%
+
5
522..5604
100.0%
+
5
1
0
0
exon-exon
7
Homo Sapiens
SNHG4 1..521
100.0%
+
5
522..5522
100.0%
+
5
1
0
0
exon-exon
8
Homo Sapiens
SNHG4 1..521
100.0%
+
5
522..4515
100.0%
+
5
1
0
0
exon-exon
9
Homo Sapiens

NM_199189.2
5..1032
99.8%
-
5

NM_000477.6
1029..1124
96.8%
+
4
1
0
0
intron-exon
10
Homo Sapiens

NM_199189.2
1..630
100.0%
+
5

NM_199189.2
627..784
100.0%
-
5
0
14959
48574
exon-exon

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