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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'MAP1LC3B'

Total of fusion sequences: 9 (from 6,491,097 parsed EST/mRNAs. Last update: 2020-08-30 12:24:27)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens

NM_022821.3
4..283
99.7%
-
1

NM_022818.4
276..313
100.0%
+
16
1
0
0
exon-exon
2
Homo Sapiens

NM_022818.4
1..643
99.6%
-
16
MAP1LC3B2
A6NCE7

NM_001085481.2
32..652
99.1%
-
12
2
23
56
exon-exon
3
Homo Sapiens

NM_022818.4
2..563
99.7%
-
16
MAP1LC3B2
A6NCE7

NM_001085481.2
10..573
99.0%
-
12
2
23
56
exon-exon
4
Homo Sapiens
1..105
98.1%
-
16
86..106
100.0%
+
3
1
0
0
intron-intron
5
Homo Sapiens
RNA45SN1
NR_145819.1
1..152
100.0%
+
21

NM_022818.4
152..559
99.8%
+
16
1
0
0
exon-exon
6
Homo Sapiens

NM_022818.4
10..127
99.2%
-
16

XR_922829.3
125..144
100.0%
-
2
1
0
0
exon-intron
7
Homo Sapiens

NM_022818.4
3..392
99.3%
+
16

XM_011519384.1
375..405
96.7%
+
10
1
0
0
exon-intron
8
Homo Sapiens
RNA45SN3
NR_146151.1
1..151
100.0%
+
21

NM_022818.4
152..570
99.3%
+
16
1
0
0
exon-exon
9
Homo Sapiens

NM_022818.4
1..157
100.0%
+
16

NM_014334.3
155..710
99.9%
-
9
1
0
0
intron-exon

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