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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'MAP1LC3B'

Total of fusion sequences: 10 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens
NM_022821.3
4..283
99.7%
-
1

NM_022818.4
276..313
100.0%
+
16
1
0
0
exon-exon
Homo Sapiens
NM_022818.4
1..643
99.6%
-
16
MAP1LC3B2
A6NCE7

NM_001085481.2
32..652
99.1%
-
12
2
23
56
exon-exon
Homo Sapiens
NM_022818.4
2..563
99.7%
-
16
MAP1LC3B2
A6NCE7

NM_001085481.2
10..573
99.0%
-
12
2
23
56
exon-exon
Homo Sapiens RNA45SN2
NR_146144.1
1..220
100.0%
+
21

NM_022818.4
217..339
99.2%
+
16
1
0
0
exon-exon
Homo Sapiens 1..105
98.1%
-
16
86..106
100.0%
+
3
1
0
0
intron-intron
Homo Sapiens RNA45S4
NR_145819.1
1..152
100.0%
+
21

NM_022818.4
152..559
99.8%
+
16
1
0
0
exon-exon
Homo Sapiens
NM_022818.4
10..127
99.2%
-
16

XR_922829.3
125..144
100.0%
-
2
1
0
0
exon-intron
Homo Sapiens
NM_022818.4
3..392
99.3%
+
16

XM_011519384.1
375..405
96.7%
+
10
1
0
0
exon-intron
Homo Sapiens RNA45SN3
NR_146151.1
1..151
100.0%
+
21

NM_022818.4
152..570
99.3%
+
16
1
0
0
exon-exon
Homo Sapiens
NM_022818.4
1..157
100.0%
+
16

NM_014334.3
155..710
99.9%
-
9
1
0
0
intron-exon

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