Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Lrrc7'

Total of fusion sequences: 11 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

NM_001177981.1
1..2313
100.0%
+
4

XM_011240122.2
2279..2325
97.9%
+
3
1
0
0
exon-intron
2
Mus musculus

XM_011240122.2
37..795
99.3%
-
3

NM_013925.4
723..834
95.2%
+
8
1
0
0
intron-intron
3
Mus musculus

XM_006525769.2
26..415
99.3%
+
18

XM_011240122.2
400..425
96.2%
-
3
1
0
0
intron-intron
4
Mus musculus

NM_020558.3
1..60
100.0%
-
11

XM_011240122.2
45..78
100.0%
+
3
1
0
0
exon-intron
5
Mus musculus
Nhp2
Q9CRB2

NM_026631.3
43..773
100.0%
+
11

XM_011240122.2
774..794
100.0%
+
3
1
0
0
exon-intron
6
Mus musculus

NM_024171.2
16..578
100.0%
+
4

XM_011240122.2
575..608
97.1%
-
3
1
0
0
exon-intron
7
Mus musculus

XM_011240122.2
461..841
95.1%
-
3

XM_006522934.3
822..1222
95.6%
-
16
1
0
0
intron-intron
8
Mus musculus

NM_001284273.1
1..421
100.0%
-
4

XM_011240122.2
418..447
100.0%
+
3
1
0
0
exon-intron
9
Mus musculus

NM_009359.4
4..390
100.0%
-
9

XM_011240122.2
388..458
97.2%
-
3
1
0
0
exon-intron
10
Mus musculus

NM_025958.2
60..203
98.1%
-
6

XM_011240122.2
197..479
95.0%
-
3
1
0
0
intron-intron

T o p