Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Lmnb1'

Total of fusion sequences: 10 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

NM_010721.2
25..262
100.0%
-
18
Malat1
B0LAE7

NR_002847.2
259..480
100.0%
+
19
1
0
0
exon-exon
2
Mus musculus

NM_026129.2
1..128
100.0%
+
5

NM_010721.2
123..215
100.0%
+
18
2
2
0
intron-exon
3
Mus musculus

NM_026129.2
1..130
98.5%
+
5

NM_010721.2
125..219
100.0%
+
18
2
2
0
intron-exon
4
Mus musculus

NM_001293772.1
1..111
100.0%
-
8

NM_010721.2
105..570
99.4%
-
18
1
0
0
intron-exon
5
Mus musculus

NM_001293772.1
1..131
100.0%
-
8

NM_010721.2
125..606
100.0%
-
18
1
0
0
intron-exon
6
Mus musculus

NM_010721.2
37..578
99.5%
-
18

XR_389259.1
578..1451
100.0%
-
5
1
0
0
exon-exon
7
Mus musculus

NM_010721.2
11..32
100.0%
+
18

XM_017321829.1
26..358
98.5%
-
6
1
0
0
intron-exon
8
Mus musculus

NM_010721.2
1..215
100.0%
+
18

XM_006504264.3
214..782
97.9%
+
5
1
0
0
exon-exon
9
Mus musculus

NM_010721.2
36..777
99.8%
+
18

ENSMUST00000054871
260..812
95.5%
+
17
1
0
0
intron-intron
10
Mus musculus

XM_011244548.2
17..713
98.8%
-
13

NM_010721.2
500..725
95.1%
+
18
1
0
0
exon-intron

T o p