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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Larp1'

Total of fusion sequences: 10 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

XM_011249280.2
4..201
99.0%
-
11

XM_011249280.2
195..360
100.0%
-
11
1
0
0
exon-exon
2
Mus musculus

NM_011239.2
1..1063
100.0%
-
16

XM_011249280.2
894..1093
96.6%
-
11
1
0
0
exon-intron
3
Mus musculus

NM_175749.2
27..3618
100.0%
-
13

XM_011249280.2
3553..3625
100.0%
-
11
1
0
0
exon-intron
4
Mus musculus
Gm10080
XR_140938.4
38..238
96.6%
-
9

XM_017314797.1
209..968
97.9%
-
11
1
0
0
exon-intron
5
Mus musculus

XM_011249280.2
4..593
100.0%
+
11
Gm16425 87..603
95.2%
+
8
1
0
0
exon-exon
6
Mus musculus

NM_145951.5
23..621
99.5%
-
X

XM_011249280.2
616..643
100.0%
+
11
1
0
0
intron-exon
7
Mus musculus
Gm34516
XR_877780.1
1..93
96.7%
+
19

XM_011249280.2
4..506
98.4%
-
11
1
0
0
intron-exon
8
Mus musculus

NM_013459.3
1..265
98.9%
+
10

XM_011249280.2
263..284
100.0%
-
11
1
0
0
exon-intron
9
Mus musculus

XM_011249280.2
1..4100
99.9%
+
11

XM_011241293.1
3234..4117
96.8%
+
6
1
0
0
exon-intron
10
Mus musculus

NM_198899.2
35..510
99.4%
-
1

XM_011249280.2
504..598
96.0%
-
11
1
0
0
intron-intron

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