Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'LYPLA1'

Total of fusion sequences: 9 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NM_006396.2
1..640
100.0%
+
11

XM_017012959.1
641..1631
99.9%
-
8
1
0
0
exon-exon
2
Homo Sapiens
DANT2
NR_130730.1
1..206
96.6%
-
X

XM_017012959.1
15..342
100.0%
+
8
0
54849
0
intron-exon
3
Homo Sapiens

XM_017012959.1
19..131
96.5%
+
8

XM_017020925.2
81..534
97.9%
+
14
2
141
0
intron-intron
4
Homo Sapiens

XM_017012959.1
18..116
97.0%
+
8

XM_017020925.2
79..533
97.9%
+
14
2
141
0
intron-intron
5
Homo Sapiens

XM_017012957.2
225..443
96.3%
+
8

NM_005308.2
343..467
95.3%
-
10
1
0
0
intron-intron
6
Homo Sapiens

NM_001279359.1
1..270
97.8%
-
8

XM_006717449.1
270..370
97.1%
-
10
1
0
0
exon-exon
7
Homo Sapiens
1..448
95.5%
-
8
434..454
100.0%
+
12
1
0
0
intron-intron
8
Homo Sapiens
SCD
O00767

NM_005063.4
17..157
98.6%
-
10

XM_017012957.2
145..192
95.9%
+
8
1
0
0
exon-intron
9
Homo Sapiens

XM_017012957.2
1..332
99.7%
-
8

XM_017004613.1
325..341
97.3%
-
2
1
0
0
exon-intron

T O P