Result for the search of Gene Name/NCBI ID(s): 'LUC7L2'

Total of fusion sequences: 15 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Homo Sapiens	SplGraphs DA302213 ANNOTATION OF CHIMERA FUSION GenBank ID: DA302213 FASTA Head Gene (1) Alignment: RAPGEF5 | OMIM: 609527 Tail Gene (2) Alignment: LUC7L2 | OMIM: 613056 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 9771 7 - 22193366 22193743 16 0 protein-coding 51631 7 + 139376058 139398684 9 1 protein-coding 558 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to LUC7 (PF03194, IPR004882) 247 326 584 2.8e-77 245.800 LUC7 N_terminus Methyltransf_32 (PF13679, IPR025714) 158 505 699 0.0072 2.500 Methyltransferase domain Updated: 2019-02-21 Owner: ChiTaRS	RAPGEF5 A0A0S2Z561 A0A0S2Z5S1 A8MQ07 C9JBS6 C9JHM4 E9PGY3 F8WD32 Q92565 XM_005249916.1	1..378 99.8%	- 7	LUC7L2 A0A0A6YYJ8 F8WEU3 Q75M91 Q9Y383 V9GZ75 NM_001244585.1	374..558 100.0%	+ 7	1 0 0	intron-exon
2 Homo Sapiens	SplGraphs BP397490 ANNOTATION OF CHIMERA FUSION GenBank ID: BP397490 FASTA Head Gene (1) Alignment: ZBTB20 | OMIM: 606025 Tail Gene (2) Alignment: LUC7L2 | OMIM: 613056 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 26137 3 - 114360516 114360608 2 0 protein-coding 51631 7 + 139341409 139345793 11 0 protein-coding 500 hg38 Updated: 2019-02-21 Owner: ChiTaRS	ZBTB20 C9JCX0 C9JUH0 Q9HC78 NM_001348803.1	1..93 100.0%	- 3	LUC7L2 A0A0A6YYJ8 F8WEU3 Q75M91 Q9Y383 V9GZ75 NM_001270643.1	94..500 98.4%	+ 7	1 0 0	intron-intron
3 Homo Sapiens	ChimerDB DW426982 ANNOTATION OF CHIMERA FUSION GenBank ID: DW426982 FASTA Head Gene (1) Alignment: DNAJC3-DT Tail Gene (2) Alignment: LUC7L2 | OMIM: 613056 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 100289274 13 - 95673296 95673443 1 1 ncRNA 51631 7 + 139407289 139409617 5 1 protein-coding 280 hg38 Updated: 2019-02-02 Owner: ChiTaRS	DNAJC3-DT NR_132117.1	17..164 100.0%	- 13	LUC7L2 A0A0A6YYJ8 F8WEU3 Q75M91 Q9Y383 V9GZ75 NM_001244585.1	164..280 98.3%	+ 7	1 0 0	exon-exon
4 Homo Sapiens	ChimerDB DW434843 ANNOTATION OF CHIMERA FUSION GenBank ID: DW434843 FASTA Head Gene (1) Alignment: DNAJC3-DT Tail Gene (2) Alignment: LUC7L2 | OMIM: 613056 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 100289274 13 - 95673296 95673443 1 1 ncRNA 51631 7 + 139407289 139409594 5 1 protein-coding 257 hg38 Updated: 2019-02-02 Owner: ChiTaRS	DNAJC3-DT NR_132117.1	17..164 100.0%	- 13	LUC7L2 A0A0A6YYJ8 F8WEU3 Q75M91 Q9Y383 V9GZ75 NM_001244585.1	164..257 100.0%	+ 7	1 0 0	exon-exon
5 Homo Sapiens	ChimerDB DW414891 ANNOTATION OF CHIMERA FUSION GenBank ID: DW414891 FASTA Head Gene (1) Alignment: DNAJC3-DT Tail Gene (2) Alignment: LUC7L2 | OMIM: 613056 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 100289274 13 - 95673296 95673443 1 1 ncRNA 51631 7 + 139407289 139409619 5 1 protein-coding 314 hg38 Updated: 2019-02-02 Owner: ChiTaRS	DNAJC3-DT NR_132117.1	17..164 100.0%	- 13	LUC7L2 A0A0A6YYJ8 F8WEU3 Q75M91 Q9Y383 V9GZ75 NM_001244585.1	164..282 100.0%	+ 7	1 0 0	exon-exon
6 Homo Sapiens	ChimerDB BJ998033 ANNOTATION OF CHIMERA FUSION GenBank ID: BJ998033 FASTA Head Gene (1) Alignment: KSR1 | OMIM: 601132 Tail Gene (2) Alignment: LUC7L2 | OMIM: 613056 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 8844 17 + 27624545 27624788 22 1 oncogene, protein-coding 51631 7 + 139375945 139402181 9 0 protein-coding 600 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to KSR1-SAM (PF13543, IPR025561) 129 86 179 6.2e-19 54.700 SAM like domain present in kinase suppressor RAS 1 C1_1 (PF00130, IPR002219, SM00109) 53 359 405 1.5e-06 14.400 Phorbol esters/diacylglycerol binding domain (C1 domain) Pkinase_Tyr (PF07714, IPR001245) 260 624 888 3.4e-51 160.100 Protein tyrosine kinase Updated: 2019-02-02 Owner: ChiTaRS	KSR1 A0A0A0MQW1 A0A2R8Y4X0 A0A2R8Y5H9 A8MY87 J3QLI1 J3QQL4 J3QR75 J3QSG8 Q8IVT5 XM_017025271.1	1..244 99.6%	+ 17	LUC7L2 A0A0A6YYJ8 F8WEU3 Q75M91 Q9Y383 V9GZ75 NM_001244585.1	245..600 100.0%	+ 7	1 0 0	exon-intron
7 Homo Sapiens	AA649594 ANNOTATION OF CHIMERA FUSION GenBank ID: AA649594 FASTA Head Gene (1) Alignment: LUC7L2 | OMIM: 613056 Tail Gene (2) Alignment: LOC100129148 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 51631 7 + 139422708 139422805 11 1 protein-coding 100129148 7 - 139422794 139422930 2 0 ncRNA 227 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to LUC7 (PF03194, IPR004882) 247 284 519 3.9e-77 245.300 LUC7 N_terminus Methyltransf_32 (PF13679, IPR025714) 158 449 634 0.0052 3.000 Methyltransferase domain Updated: 2019-02-20 Owner: ChiTaRS	LUC7L2 A0A0A6YYJ8 F8WEU3 Q75M91 Q9Y383 V9GZ75 NM_001244585.1	1..99 95.9%	+ 7	LOC100129148 NR_033999.1	85..221 100.0%	- 7	1 0 0	exon-intron
8 Homo Sapiens	EC568412 ANNOTATION OF CHIMERA FUSION GenBank ID: EC568412 FASTA Head Gene (1) Alignment: SHROOM3 | OMIM: 604570 Tail Gene (2) Alignment: LUC7L2 | OMIM: 613056 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 57619 4 + 76551803 76551822 0 0 protein-coding 51631 7 + 139423053 139423144 1 1 protein-coding 123 hg38 Updated: 2019-03-27 Owner: ChiTaRS	SHROOM3 A0A2R8Y5P9 A0A2R8Y7T7 Q8TF72 XM_011532158.3	19..38 100.0%	+ 4	LUC7L2 A0A0A6YYJ8 F8WEU3 Q75M91 Q9Y383 V9GZ75 NM_001270643.1	35..120 97.7%	+ 7	1 0 0	intron-exon
9 Homo Sapiens	AI078265 ANNOTATION OF CHIMERA FUSION GenBank ID: AI078265 FASTA Head Gene (1) Alignment: LUC7L2 | OMIM: 613056 Tail Gene (2) Alignment: CHD2 | OMIM: 602119 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 51631 7 - 139345500 139345795 1 0 protein-coding 1106 15 - 93024762 93024896 1 1 oncogene, protein-coding 424 hg38 Updated: 2019-02-20 Owner: ChiTaRS	LUC7L2 A0A0A6YYJ8 F8WEU3 Q75M91 Q9Y383 V9GZ75 NM_001244585.1	2..297 100.0%	- 7	CHD2 A0A024RC75 A0A0D9SEH6 A0A0D9SEP7 A0A0D9SET4 A0A0D9SEU0 A0A0D9SF92 A0A0D9SFA3 A0A0D9SFV4 A0A0D9SFV8 A0A0D9SGA6 A0A0D9SGK0 A0A1B0GTM9 A0A1B0GTU9 A0A1B0GU59 B7Z3I4 O14647 Q8N677 NM_001271.3	290..424 100.0%	- 15	1 0 0	intron-exon
10 Homo Sapiens	CB050586 ANNOTATION OF CHIMERA FUSION GenBank ID: CB050586 FASTA Head Gene (1) Alignment: LUC7L2 | OMIM: 613056 Tail Gene (2) Alignment: GTSCR1 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 51631 7 + 139422930 139423163 1 1 protein-coding 220158 18 - 70650350 70650384 0 0 protein-coding, ncRNA 276 hg38 Updated: 2019-04-13 Owner: ChiTaRS	LUC7L2 A0A0A6YYJ8 F8WEU3 Q75M91 Q9Y383 V9GZ75 NM_001270643.1	10..243 99.6%	+ 7	GTSCR1 Q86UQ5 NM_001278515.1	239..273 100.0%	- 18	1 0 0	exon-intron

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