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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'LRR1'

Total of fusion sequences: 6 (from 12,143,238 parsed EST/mRNAs. Last update: 2021-04-05 16:54:11)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
XM_017004359.1
1..957
99.9%
-
2

NR_037792.1
459..1590
98.2%
+
14
1
0
0
exon-intron
2
Homo Sapiens

NR_037792.1
17..60
100.0%
+
14

NM_145858.2
60..496
95.2%
+
21
1
0
0
intron-exon
3
Homo Sapiens

NM_000089.3
8..335
97.9%
+
7

NR_037792.1
330..373
100.0%
-
14
1
0
0
exon-intron
4
Homo Sapiens

NR_037792.1
1..40
100.0%
+
14

NM_175063.5
40..366
97.6%
-
19
1
0
0
intron-exon
5
Homo Sapiens

NR_037792.1
6..114
99.1%
-
14

NM_007155.5
101..323
100.0%
-
7
1
0
0
exon-intron
6
Homo Sapiens

NM_001643.1
1..470
100.0%
-
1

NR_037792.1
468..510
100.0%
-
14
1
0
0
exon-intron

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