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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'LRP6'

Total of fusion sequences: 12 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB C5orf66
Q9H5L9

NM_001277348.1
18..237
99.6%
+
5

XR_002957325.1
232..368
99.3%
+
12
1
0
0
intron-exon
2
Homo Sapiens

XR_429035.3
8..36
100.0%
+
12

XR_002957325.1
30..542
100.0%
-
12
2
27
511
exon-exon
3
Homo Sapiens

XR_429035.3
3..515
100.0%
+
12

XR_429035.3
509..537
100.0%
-
12
2
27
511
exon-exon
4
Homo Sapiens

NM_001146188.2
5..114
97.3%
+
16

XR_429035.3
99..226
97.7%
+
12
2
0
32
exon-intron
5
Homo Sapiens

NM_001146188.2
1..81
97.5%
+
16

XR_429035.3
66..192
100.0%
+
12
2
0
32
exon-intron
6
Homo Sapiens

XM_011524984.3
12..43
96.8%
-
17

XR_429035.3
19..403
100.0%
+
12
1
0
0
intron-intron
7
Homo Sapiens

XR_429035.3
1..385
100.0%
-
12

XM_011524984.3
361..392
96.8%
+
17
1
0
0
intron-intron
8
Homo Sapiens

XR_429035.3
11..795
99.2%
-
12

XM_005263372.3
777..802
100.0%
-
4
1
0
0
intron-intron
9
Homo Sapiens

XR_429035.3
8..43
97.3%
-
12
HNRNPA1P48
A0A2R8Y4L2
21..166
98.7%
-
16
1
0
0
intron-exon
10
Homo Sapiens

XR_429035.3
1..363
100.0%
-
12

NM_001287188.1
356..425
100.0%
-
2
1
0
0
exon-exon

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