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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'LINC01420'

Total of fusion sequences: 12 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens
XM_017017425.1
77..174
100.0%
+
11

NM_001348129.1
161..442
100.0%
+
X
1
0
0
intron-intron
Homo Sapiens
XM_011534521.3
2..326
97.5%
-
5

NM_001348129.1
297..340
97.5%
-
X
1
0
0
intron-intron
Homo Sapiens
XM_011528695.3
1..140
99.3%
-
20

NM_001348129.1
135..384
98.8%
+
X
1
0
0
exon-exon
Homo Sapiens
XM_011528695.3
1..140
100.0%
-
20

NM_001348129.1
135..372
99.6%
+
X
1
0
0
exon-exon
Homo Sapiens
NM_001348129.1
1..610
99.1%
+
X
LOC107985996
XR_001739919.2
474..666
95.2%
-
2
1
0
0
intron-intron
Homo Sapiens
NM_001348129.1
33..183
98.0%
+
X

NM_018890.3
177..437
100.0%
-
7
1
0
0
intron-exon
Homo Sapiens
XM_017027524.1
1..39
100.0%
+
19

NM_001348129.1
31..481
95.6%
+
X
1
0
0
exon-intron
Homo Sapiens
NM_013393.1
7..31
100.0%
+
7

NM_001348129.1
20..424
95.9%
+
X
1
0
0
intron-intron
Homo Sapiens MXRA5Y 94..221
95.7%
+
Y

NM_001348129.1
107..230
96.5%
+
X
1
0
0
intron-intron
Homo Sapiens
NM_001348129.1
8..332
99.7%
+
X

NM_001319307.1
317..349
100.0%
+
4
1
0
0
exon-intron

T o p