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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'LDAH'

Total of fusion sequences: 4 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB MALAT1
NR_144568.1
16..182
99.5%
+
11

XR_939700.2
178..619
100.0%
-
2
1
0
0
exon-exon
2
Homo Sapiens
IGBP1
P78318

NM_001551.2
141..169
96.3%
+
X

XR_001738876.2
157..362
97.6%
+
2
1
0
0
intron-exon
3
Homo Sapiens
CCDC162P
NR_152435.1
1..359
100.0%
+
6

XR_001738875.2
350..370
100.0%
-
2
1
0
0
intron-intron
4
Homo Sapiens

XM_024448643.1
1..158
99.4%
+
11

XR_001738876.2
156..454
98.0%
+
2
1
0
0
intron-exon

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