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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'LCP1'

Total of fusion sequences: 18 (from 1493742 parsed EST/mRNAs. Last update 2019-12-11 12:04:16)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
XM_006722932.2
1..150
98.7%
-
19

NM_002298.4
143..339
99.5%
-
13
1
0
0
exon-exon
2
Homo Sapiens
SplGraphs
NM_002815.3
1..172
98.9%
+
17

NM_002298.4
168..662
99.4%
-
13
1
0
0
exon-exon
3
Homo Sapiens
1..205
99.6%
-
13
203..587
100.0%
-
13
1
0
0
exon-exon
4
Homo Sapiens

ENST00000398576
154..478
100.0%
-
13

XM_011524160.2
475..1571
99.8%
-
17
0
0
53760
intron-exon
5
Homo Sapiens

XM_024449337.1
1..25
100.0%
+
13

XM_005266374.2
24..478
100.0%
+
13
1
0
0
intron-exon
6
Homo Sapiens

XM_005266374.2
11..465
100.0%
-
13

XM_024449337.1
464..488
100.0%
-
13
1
0
0
exon-intron
7
Homo Sapiens

NM_002298.4
1..109
99.1%
+
13

XM_017018451.2
103..543
99.8%
+
11
1
0
0
exon-intron
8
Homo Sapiens

NM_002298.4
1..109
99.1%
+
13

XM_017018451.2
103..415
99.7%
+
11
1
0
0
exon-intron
9
Homo Sapiens

ENST00000398576
154..478
100.0%
-
13

XM_011524163.3
475..699
99.6%
-
17
0
0
53760
intron-exon
10
Homo Sapiens

NM_002074.4
44..239
96.9%
-
1

NM_002298.4
232..425
95.9%
+
13
1
0
0
intron-exon

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