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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'LCOR'

Total of fusion sequences: 10 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens ChimerDB LOC105376392
XR_930633.1
1..85
98.9%
-
10
LCOR
NM_001346516.1
78..312
99.6%
-
10
1
0
0
intron-exon
Homo Sapiens LCOR
NM_001170766.1
2..408
100.0%
-
10

NM_001312909.1
399..580
99.5%
+
11
1
0
0
intron-intron
Homo Sapiens LCOR
NM_001170766.1
2..408
100.0%
-
10

NM_001312909.1
399..580
99.5%
+
11
1
0
0
intron-intron
Homo Sapiens
NM_001287215.1
23..754
99.9%
+
6
LCOR
NM_001170766.1
748..770
95.7%
+
10
1
0
0
exon-intron
Homo Sapiens LCOR
ENST00000421806
8..478
100.0%
+
10

XM_011535099.2
87..498
97.6%
+
13
1
0
0
exon-intron
Homo Sapiens LCOR 8..377
100.0%
+
10
360..380
100.0%
+
19
1
0
0
intron-intron
Homo Sapiens
XM_017006625.2
1..448
98.2%
-
3
LCOR
NM_001170765.1
413..475
97.8%
-
10
1
0
0
exon-exon
Homo Sapiens LCOR 1..168
99.5%
-
10
LCOR 155..472
100.0%
-
10
1
0
0
exon-exon
Homo Sapiens
NM_001035258.1
1..351
100.0%
+
17
LCOR
NM_001170766.1
348..428
98.3%
-
10
1
0
0
exon-intron
Homo Sapiens LCOR
NM_001346516.1
20..352
99.4%
-
10
BCAR3
O75815

XM_017002480.1
345..567
98.7%
-
1
1
0
0
exon-intron

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