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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'LAMA5'

Total of fusion sequences: 10 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB H19
NR_002196.2
1..137
100.0%
-
11

NM_005560.4
134..384
100.0%
-
20
1
0
0
exon-exon
2
Homo Sapiens

NM_002836.3
1..143
100.0%
-
20

NM_005560.4
140..496
100.0%
-
20
1
0
0
intron-exon
3
Homo Sapiens

XM_006723796.3
1..44
100.0%
-
20
MTATP6P1 34..103
95.7%
+
1
1
0
0
exon-intron
4
Homo Sapiens

XM_006723796.3
1..43
100.0%
-
20
MTATP6P1 33..102
95.7%
+
1
1
0
0
exon-intron
5
Homo Sapiens

XM_006723796.3
1..56
100.0%
+
20
LINC01036
NR_126347.1
45..118
95.4%
-
1
1
0
0
intron-intron
6
Homo Sapiens

XM_006723796.3
18..91
95.5%
+
20
LOC100505715
NR_038334.1
58..133
95.7%
+
19
1
0
0
intron-intron
7
Homo Sapiens

XM_006723796.3
1..5
99.3%
-
20

XM_024451818.1
6..410
99.3%
-
20
1
0
0
exon-exon
8
Homo Sapiens

XM_017023318.2
2..28
96.3%
-
16

XM_006723796.3
26..110
100.0%
+
20
1
0
0
intron-exon
9
Homo Sapiens

NM_005560.4
1..233
100.0%
-
20
LOC105379228
XR_948935.2
225..257
100.0%
-
8
1
0
0
exon-intron
10
Homo Sapiens

NM_000852.3
17..246
100.0%
-
11

NM_005560.4
244..323
98.8%
+
20
1
0
0
exon-exon

T o p