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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'LAMA5'

Total of fusion sequences: 10 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens ChimerDB H19
NR_002196.2
1..137
100.0%
-
11

NM_005560.4
134..384
100.0%
-
20
1
0
0
exon-exon
Homo Sapiens
NM_002836.3
1..143
100.0%
-
20

NM_005560.4
140..496
100.0%
-
20
1
0
0
intron-exon
Homo Sapiens
XM_006723796.3
1..44
100.0%
-
20
MTATP6P1 34..103
95.7%
+
1
1
0
0
exon-intron
Homo Sapiens
XM_006723796.3
1..43
100.0%
-
20
MTATP6P1 33..102
95.7%
+
1
1
0
0
exon-intron
Homo Sapiens
XM_006723796.3
1..56
100.0%
+
20
LINC01036
NR_126347.1
45..118
95.4%
-
1
1
0
0
intron-intron
Homo Sapiens
XM_006723796.3
18..91
95.5%
+
20
LOC100505715
NR_038334.1
58..133
95.7%
+
19
1
0
0
intron-intron
Homo Sapiens
XM_006723796.3
1..5
99.3%
-
20

XM_024451818.1
6..410
99.3%
-
20
1
0
0
exon-exon
Homo Sapiens
XM_017023318.2
2..28
96.3%
-
16

XM_006723796.3
26..110
100.0%
+
20
1
0
0
intron-exon
Homo Sapiens
NM_005560.4
1..233
100.0%
-
20
LOC105379228
XR_948935.2
225..257
100.0%
-
8
1
0
0
exon-intron
Homo Sapiens
NM_000852.3
17..246
100.0%
-
11

NM_005560.4
244..323
98.8%
+
20
1
0
0
exon-exon

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