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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'Krt1'

Total of fusion sequences: 5 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Mus musculusSplGraphs
NM_008473.2
1..327
100.0%
-
15

XM_006501352.1
319..536
99.1%
+
3
1
0
0
exon-exon
Mus musculusSplGraphs
NM_008473.2
1..278
100.0%
-
15

NM_010752.3
274..404
100.0%
-
5
1
0
0
exon-exon
Homo Sapiens
NM_006121.3
1..95
100.0%
+
12

NM_001032283.2
91..490
99.8%
-
12
1
0
0
exon-exon
Homo Sapiens
NM_017811.3
1..683
100.0%
+
9

NM_006121.3
680..3042
100.0%
-
12
1
0
0
exon-exon
Mus musculus
NM_008473.2
1..732
100.0%
-
15

XM_011246333.1
728..838
100.0%
-
17
1
0
0
exon-exon

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