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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Itgb5'

Total of fusion sequences: 11 (from 2,403,910 parsed EST/mRNAs. Last update 2020-02-09 10:24:42)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

NM_177664.5
1..1833
98.9%
-
3

NM_001145884.1
1755..1845
97.9%
-
16
1
0
0
exon-intron
2
Mus musculus

NM_001145884.1
1..2999
100.0%
+
16

XM_006519154.3
2964..3019
97.2%
-
14
1
0
0
exon-intron
3
Mus musculus

NM_001145884.1
1..627
100.0%
+
16
Gm38317 361..669
100.0%
+
3
1
0
0
exon-intron
4
Mus musculus

NM_001145884.1
1..384
100.0%
+
16

XR_001781560.1
385..414
100.0%
-
15
1
0
0
exon-intron
5
Mus musculus

NM_001145884.1
1..26
100.0%
+
16

XM_017318078.1
17..765
98.4%
+
19
1
0
0
intron-exon
6
Mus musculus

NM_001145884.1
4..119
100.0%
-
16

XM_011248919.2
113..229
98.3%
+
11
1
0
0
exon-intron
7
Mus musculus

NM_001164655.1
17..355
100.0%
+
7

NM_001145884.1
355..437
97.3%
+
16
1
0
0
exon-intron
8
Mus musculus

NM_001145884.1
530..929
96.3%
+
16

XM_006506086.2
930..960
100.0%
+
6
1
0
0
intron-intron
9
Mus musculus

XM_011245633.2
2..22
100.0%
-
15

NM_001145884.1
19..365
99.8%
-
16
1
0
0
intron-exon
10
Mus musculus

NM_001145884.1
5..95
100.0%
+
16

NM_178793.4
60..130
98.0%
+
18
1
0
0
exon-intron

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