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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Itgb1'

Total of fusion sequences: 8 (from 1493742 parsed EST/mRNAs. Last update 2019-12-11 12:04:16)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

NM_010578.2
1..131
99.3%
+
8

NM_010578.2
130..390
100.0%
-
8
1
0
0
exon-exon
2
Mus musculus

XM_006520829.3
19..73
97.7%
-
15

NM_010578.2
47..787
99.6%
-
8
1
0
0
intron-exon
3
Mus musculus

NM_010578.2
17..621
99.9%
-
8
Vmn1r73
Q8R293

NM_134203.1
612..635
100.0%
-
7
1
0
0
exon-exon
4
Mus musculus

NM_010578.2
4..656
99.0%
+
8

NM_178749.3
650..671
100.0%
-
18
1
0
0
exon-intron
5
Mus musculus
Tmem151b
Q68FE7

NM_001013749.2
1..28
100.0%
-
17

NM_010578.2
16..489
100.0%
+
8
1
0
0
exon-exon
6
Mus musculus

NM_010578.2
12..562
98.8%
+
8

XM_006499086.3
555..578
100.0%
-
2
1
0
0
exon-intron
7
Mus musculus

NM_010578.2
44..771
99.4%
+
8

NM_001271417.1
770..836
98.5%
-
15
1
0
0
exon-exon
8
Mus musculus

XM_011245989.2
2..21
100.0%
-
16

NM_010578.2
15..498
99.8%
-
8
1
0
0
intron-exon

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