Result for the search: Gene Name/NCBI ID(s): 'ITSN1'

Total of fusion sequences: 38 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	-	16	17
Homo Sapiens	BG941545 ANNOTATION OF CHIMERA FUSION GenBank ID: BG941545 FASTA Head Gene (1) Alignment: ITSN1 | OMIM: 602442 Tail Gene (2) Alignment: POMP | OMIM: 613386 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 6453 21 + 33725123 33725153 0 0 protein-coding 51371 13 - 28672364 28678209 2 1 protein-coding 275 hg38 Updated: 2019-04-18 Owner: ChiTaRS	ITSN1 A0A2X0TVY8 A7XZY7 A8CTZ0 A8W608 C9J1A4 C9JQZ7 C9JXS9 D6PAV9 D6PAW0 D6PAW2 F8W7U0 H0Y3G5 H0Y523 H0Y6W3 H0Y7J7 H7C3F1 H7C429 Q0PW96 Q14BD4 Q15811 Q2LAE2 Q6GMY7 Q6J1T1 Q6J1T2 Q6J333 Q6J334 Q6PD56 Q7Z452 Q7Z453 Q86VI9 Q8IWU0 Q9UET4 XM_017028428.1	1..31 100.0%	+ 21	POMP A0A1W2PS02 Q9Y244 NM_015932.5	31..275 98.0%	- 13	1 0 0	intron-exon
Homo Sapiens	AI826469 ANNOTATION OF CHIMERA FUSION GenBank ID: AI826469 FASTA Head Gene (1) Alignment: ITSN1 | OMIM: 602442 Tail Gene (2) Alignment: GPR75-ASB3 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 6453 21 + 33725132 33725176 0 0 protein-coding 100302652 2 - 53818193 53818796 0 0 protein-coding 626 hg38 Updated: 2019-04-14 Owner: ChiTaRS	ITSN1 A0A2X0TVY8 A7XZY7 A8CTZ0 A8W608 C9J1A4 C9JQZ7 C9JXS9 D6PAV9 D6PAW0 D6PAW2 F8W7U0 H0Y3G5 H0Y523 H0Y6W3 H0Y7J7 H7C3F1 H7C429 Q0PW96 Q14BD4 Q15811 Q2LAE2 Q6GMY7 Q6J1T1 Q6J1T2 Q6J333 Q6J334 Q6PD56 Q7Z452 Q7Z453 Q86VI9 Q8IWU0 Q9UET4 XM_017028428.1	3..32 100.0%	+ 21	GPR75-ASB3 A0A0A6YYF3 NM_001164165.1	23..626 99.4%	- 2	1 0 0	intron-intron
Homo Sapiens	BF763320 ANNOTATION OF CHIMERA FUSION GenBank ID: BF763320 FASTA Head Gene (1) Alignment: ITSN1 | OMIM: 602442 Tail Gene (2) Alignment: ITSN1 | OMIM: 602442 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 6453 21 + 33815462 33815738 23 0 protein-coding 6453 21 + 33751829 33755371 34 1 protein-coding 424 hg38 Updated: 2019-02-17 Owner: ChiTaRS	ITSN1 A0A2X0TVY8 A7XZY7 A8CTZ0 A8W608 C9J1A4 C9JQZ7 C9JXS9 D6PAV9 D6PAW0 D6PAW2 F8W7U0 H0Y3G5 H0Y523 H0Y6W3 H0Y7J7 H7C3F1 H7C429 Q0PW96 Q14BD4 Q15811 Q2LAE2 Q6GMY7 Q6J1T1 Q6J1T2 Q6J333 Q6J334 Q6PD56 Q7Z452 Q7Z453 Q86VI9 Q8IWU0 Q9UET4 XM_017028428.1	1..277 99.0%	+ 21	ITSN1 A0A2X0TVY8 A7XZY7 A8CTZ0 A8W608 C9J1A4 C9JQZ7 C9JXS9 D6PAV9 D6PAW0 D6PAW2 F8W7U0 H0Y3G5 H0Y523 H0Y6W3 H0Y7J7 H7C3F1 H7C429 Q0PW96 Q14BD4 Q15811 Q2LAE2 Q6GMY7 Q6J1T1 Q6J1T2 Q6J333 Q6J334 Q6PD56 Q7Z452 Q7Z453 Q86VI9 Q8IWU0 Q9UET4 XM_017028428.1	272..424 100.0%	+ 21	2 20 9	intron-exon
Homo Sapiens	BF764099 ANNOTATION OF CHIMERA FUSION GenBank ID: BF764099 FASTA Head Gene (1) Alignment: ITSN1 | OMIM: 602442 Tail Gene (2) Alignment: ITSN1 | OMIM: 602442 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 6453 21 + 33815453 33815738 23 0 protein-coding 6453 21 + 33751829 33755391 34 1 protein-coding 468 hg38 Updated: 2019-02-17 Owner: ChiTaRS	ITSN1 A0A2X0TVY8 A7XZY7 A8CTZ0 A8W608 C9J1A4 C9JQZ7 C9JXS9 D6PAV9 D6PAW0 D6PAW2 F8W7U0 H0Y3G5 H0Y523 H0Y6W3 H0Y7J7 H7C3F1 H7C429 Q0PW96 Q14BD4 Q15811 Q2LAE2 Q6GMY7 Q6J1T1 Q6J1T2 Q6J333 Q6J334 Q6PD56 Q7Z452 Q7Z453 Q86VI9 Q8IWU0 Q9UET4 XM_017028428.1	19..301 99.7%	+ 21	ITSN1 A0A2X0TVY8 A7XZY7 A8CTZ0 A8W608 C9J1A4 C9JQZ7 C9JXS9 D6PAV9 D6PAW0 D6PAW2 F8W7U0 H0Y3G5 H0Y523 H0Y6W3 H0Y7J7 H7C3F1 H7C429 Q0PW96 Q14BD4 Q15811 Q2LAE2 Q6GMY7 Q6J1T1 Q6J1T2 Q6J333 Q6J334 Q6PD56 Q7Z452 Q7Z453 Q86VI9 Q8IWU0 Q9UET4 XM_017028428.1	296..468 99.5%	+ 21	2 20 9	intron-exon
Homo Sapiens	BG944441 ANNOTATION OF CHIMERA FUSION GenBank ID: BG944441 FASTA Head Gene (1) Alignment: CEP295 Tail Gene (2) Alignment: ITSN1 | OMIM: 602442 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 85459 11 + 93661682 93668847 4 1 protein-coding 6453 21 + 33689968 33689997 0 0 protein-coding 495 hg38 Updated: 2019-04-18 Owner: ChiTaRS	CEP295 E9PJG3 E9PJY3 E9PM20 H0YDK0 Q9C0D2 XM_005274367.2	2..469 100.0%	+ 11	ITSN1 A0A2X0TVY8 A7XZY7 A8CTZ0 A8W608 C9J1A4 C9JQZ7 C9JXS9 D6PAV9 D6PAW0 D6PAW2 F8W7U0 H0Y3G5 H0Y523 H0Y6W3 H0Y7J7 H7C3F1 H7C429 Q0PW96 Q14BD4 Q15811 Q2LAE2 Q6GMY7 Q6J1T1 Q6J1T2 Q6J333 Q6J334 Q6PD56 Q7Z452 Q7Z453 Q86VI9 Q8IWU0 Q9UET4 XM_017028428.1	467..495 100.0%	+ 21	1 0 0	exon-intron
Homo Sapiens	AA226543 ANNOTATION OF CHIMERA FUSION GenBank ID: AA226543 FASTA Head Gene (1) Alignment: ITSN1 | OMIM: 602442 Tail Gene (2) Alignment: ARID2 | OMIM: 609539 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 6453 21 - 33689953 33689975 0 0 protein-coding 196528 12 - 45901504 45901682 0 0 oncogene, tumor suppressor 195 hg38 Updated: 2019-04-13 Owner: ChiTaRS	ITSN1 A0A2X0TVY8 A7XZY7 A8CTZ0 A8W608 C9J1A4 C9JQZ7 C9JXS9 D6PAV9 D6PAW0 D6PAW2 F8W7U0 H0Y3G5 H0Y523 H0Y6W3 H0Y7J7 H7C3F1 H7C429 Q0PW96 Q14BD4 Q15811 Q2LAE2 Q6GMY7 Q6J1T1 Q6J1T2 Q6J333 Q6J334 Q6PD56 Q7Z452 Q7Z453 Q86VI9 Q8IWU0 Q9UET4 XM_017028428.1	1..23 100.0%	- 21	ARID2 A0A087WY37 F8VWP4 F8W108 F8WCU9 Q4G0S8 Q68CP9 Q8WV72 XR_944505.3	17..195 100.0%	- 12	1 0 0	intron-intron
Homo Sapiens	W35360 ANNOTATION OF CHIMERA FUSION GenBank ID: W35360 FASTA Head Gene (1) Alignment: ITSN1 | OMIM: 602442 Tail Gene (2) Alignment: CRYBB2 | OMIM: 123620 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 6453 21 + 33805839 33805970 0 0 protein-coding 1415 22 + 25217978 25218474 0 0 protein-coding 241 hg38 Updated: 2019-04-18 Owner: ChiTaRS	ITSN1 A0A2X0TVY8 A7XZY7 A8CTZ0 A8W608 C9J1A4 C9JQZ7 C9JXS9 D6PAV9 D6PAW0 D6PAW2 F8W7U0 H0Y3G5 H0Y523 H0Y6W3 H0Y7J7 H7C3F1 H7C429 Q0PW96 Q14BD4 Q15811 Q2LAE2 Q6GMY7 Q6J1T1 Q6J1T2 Q6J333 Q6J334 Q6PD56 Q7Z452 Q7Z453 Q86VI9 Q8IWU0 Q9UET4 XM_017028428.1	102..173 96.7%	+ 21	CRYBB2 A0A0H3W5H9 A0A0H3W5J2 A0A0H3W5Q8 A0A0H3W5U0 P43320 R4UMM2 XM_011529900.2	124..224 95.7%	+ 22	1 0 0	intron-intron
Homo Sapiens	AI003822 ANNOTATION OF CHIMERA FUSION GenBank ID: AI003822 FASTA Head Gene (1) Alignment: NADK2 | OMIM: 615787 Tail Gene (2) Alignment: ITSN1 | OMIM: 602442 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 133686 5 + 36192885 36193213 1 1 protein-coding 6453 21 - 33826516 33826629 15 0 protein-coding 437 hg38 Updated: 2019-02-17 Owner: ChiTaRS	NADK2 A0A0C4DGV3 B7Z8V7 D6RHI4 H0Y9H7 Q49AR0 Q4G0N4 XM_005248241.4	3..331 100.0%	+ 5	ITSN1 A0A2X0TVY8 A7XZY7 A8CTZ0 A8W608 C9J1A4 C9JQZ7 C9JXS9 D6PAV9 D6PAW0 D6PAW2 F8W7U0 H0Y3G5 H0Y523 H0Y6W3 H0Y7J7 H7C3F1 H7C429 Q0PW96 Q14BD4 Q15811 Q2LAE2 Q6GMY7 Q6J1T1 Q6J1T2 Q6J333 Q6J334 Q6PD56 Q7Z452 Q7Z453 Q86VI9 Q8IWU0 Q9UET4 XM_017028428.1	326..437 99.2%	- 21	1 0 0	exon-intron
Homo Sapiens	AY603419 ANNOTATION OF CHIMERA FUSION GenBank ID: AY603419 FASTA UniProtKB: Q6J333 Intersectin 1 isoform 11 (Fragment) Fusion Gene(s): ITSN1 Head Gene (1) Alignment: LOC107985511 Tail Gene (2) Alignment: ITSN1 | OMIM: 602442 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 107985511 21 - 17196983 17197003 1 0 ncRNA 6453 21 + 33810974 33817390 20 1 protein-coding 590 hg38 Updated: 2019-02-17 Owner: ChiTaRS	LOC107985511 XR_001754975.1	7..27 100.0%	- 21	ITSN1 A0A2X0TVY8 A7XZY7 A8CTZ0 A8W608 C9J1A4 C9JQZ7 C9JXS9 D6PAV9 D6PAW0 D6PAW2 F8W7U0 H0Y3G5 H0Y523 H0Y6W3 H0Y7J7 H7C3F1 H7C429 Q0PW96 Q14BD4 Q15811 Q2LAE2 Q6GMY7 Q6J1T1 Q6J1T2 Q6J333 Q6J334 Q6PD56 Q7Z452 Q7Z453 Q86VI9 Q8IWU0 Q9UET4 XM_017028428.1	22..590 100.0%	+ 21	1 0 0	intron-exon
Homo Sapiens	CB049217 ANNOTATION OF CHIMERA FUSION GenBank ID: CB049217 FASTA Head Gene (1) Alignment: ITSN1 | OMIM: 602442 Tail Gene (2) Alignment: MFSD2A | OMIM: 614397 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 6453 21 + 33725134 33725153 0 0 protein-coding 84879 1 - 39968643 39969956 2 1 tumor suppressor 597 hg38 Updated: 2019-04-13 Owner: ChiTaRS	ITSN1 A0A2X0TVY8 A7XZY7 A8CTZ0 A8W608 C9J1A4 C9JQZ7 C9JXS9 D6PAV9 D6PAW0 D6PAW2 F8W7U0 H0Y3G5 H0Y523 H0Y6W3 H0Y7J7 H7C3F1 H7C429 Q0PW96 Q14BD4 Q15811 Q2LAE2 Q6GMY7 Q6J1T1 Q6J1T2 Q6J333 Q6J334 Q6PD56 Q7Z452 Q7Z453 Q86VI9 Q8IWU0 Q9UET4 XM_017028428.1	17..36 100.0%	+ 21	MFSD2A E7EPI8 Q5SSK0 Q8NA29 NM_001349821.1	35..588 99.9%	- 1	1 0 0	intron-exon

T o p