Search Database Collection

Result for the search: Gene Name/NCBI ID(s): 'ITSN1'

Total of fusion sequences: 2 (from 393,531 parsed EST/mRNAs. Last update 2018-11-20)

Organism	Fusion: Graphical View, Annotation, PPI	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed, iHOP reference
		Name(s)1	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,17	8	9,10,11	12,25	13,14,15	16	17
Homo Sapiens	AI821507 ANNOTATION OF CHIMERA FUSION GenBank ID: AI821507 FASTA Head Gene (1) Alignment: ITSN1 | OMIM: 602442 Tail Gene (2) Alignment: PRRX2 | OMIM: 604675 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 6453 21 + 33776932 33777043 2 0 protein-coding 51450 9 - 129722450 129722674 1 0 oncogene 234 hg38 Updated: 2018-07-30 Owner: ChiTaRS	ITSN1 A7XZY7 A8CTZ0 A8W608 C9J1A4 C9JQZ7 C9JXS9 D6PAV9 D6PAW0 D6PAW2 F8W7U0 H0Y3G5 H0Y523 H0Y6W3 H0Y7J7 H7C3F1 H7C429 Q0PW96 Q14BD4 Q15811 Q2LAE2 Q6GMY7 Q6J1T1 Q6J1T2 Q6J333 Q6J334 Q6PD56 Q7Z452 Q7Z453 Q86VI9 Q8IWU0 Q9UET4	1..28 100.0%	+ 21	PRRX2 Q99811	10..234 100.0%	- 9	1 0 0
Homo Sapiens	GW493032 ANNOTATION OF CHIMERA FUSION GenBank ID: GW493032 FASTA Head Gene (1) Alignment: TAGLN2 | OMIM: 604634 Tail Gene (2) Alignment: ITSN1 | OMIM: 602442 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 8407 1 - 159918107 159918276 1 0 protein-coding 6453 21 - 33671906 33671925 1 0 protein-coding 250 hg38 Updated: 2018-06-30 Owner: ChiTaRS	TAGLN2 P37802 Q5ZEZ7 X6RJP6	8..177 100.0%	- 1	ITSN1 A7XZY7 A8CTZ0 A8W608 C9J1A4 C9JQZ7 C9JXS9 D6PAV9 D6PAW0 D6PAW2 F8W7U0 H0Y3G5 H0Y523 H0Y6W3 H0Y7J7 H7C3F1 H7C429 Q0PW96 Q14BD4 Q15811 Q2LAE2 Q6GMY7 Q6J1T1 Q6J1T2 Q6J333 Q6J334 Q6PD56 Q7Z452 Q7Z453 Q86VI9 Q8IWU0 Q9UET4	164..183 100.0%	- 21	1 0 0