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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'ITGB4'

Total of fusion sequences: 6 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
XM_005257309.2
21..300
99.7%
+
17

XM_005246720.3
294..353
100.0%
-
2
1
0
0
exon-intron
2
Homo Sapiens
ChimerDB
XM_006721866.3
13..78
100.0%
+
17
RP11-679C8.2 78..97
100.0%
+
4
1
0
0
exon-intron
3
Homo Sapiens
ChimerDB
XM_005257309.2
19..165
98.7%
+
17
LOC112268284
XM_024452143.1
165..270
98.2%
-
21
1
0
0
exon-intron
4
Homo Sapiens

XM_005257309.2
61..326
98.5%
+
17

XM_017006629.1
327..436
99.1%
+
3
1
0
0
exon-exon
5
Homo Sapiens

NM_001324415.1
29..252
98.7%
+
16

XM_005257309.2
253..311
100.0%
+
17
1
0
0
exon-exon
6
Homo Sapiens

XM_006721866.3
1..337
99.2%
+
17
LOC102725238
XR_934763.1
334..356
100.0%
-
17
1
0
0
exon-intron

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