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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'ITGB1'

Total of fusion sequences: 6 (from 3,568,812 parsed EST/mRNAs. Last update 2020-07-14 10:36:55)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens

NM_033668.2
7..111
100.0%
+
10

NM_133376.2
105..300
99.5%
-
10
0
78
2549
exon-exon
2
Homo Sapiens

NM_033668.2
9..153
99.4%
+
10

NM_133376.2
152..629
98.6%
-
10
0
78
2549
exon-exon
3
Homo Sapiens

NM_001284265.1
13..550
99.9%
-
22

NM_133376.2
543..606
98.5%
-
10
1
0
0
intron-intron
4
Homo Sapiens

NM_133376.2
1..588
99.2%
-
10
ITGB1P1 31..626
98.7%
+
19
1
0
0
exon-exon
5
Homo Sapiens

XM_011542228.3
19..115
100.0%
+
1

NM_133376.2
110..783
99.8%
-
10
1
0
0
exon-exon
6
Homo Sapiens

XM_011538689.1
1..105
96.8%
+
12

NM_033668.2
16..129
99.2%
+
10
1
0
0
intron-exon

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