Result for the search of Gene Name/NCBI ID(s): 'ITGA1'

Total of fusion sequences: 7 (from 3,568,812 parsed EST/mRNAs. Last update: 2020-07-14 10:36:55)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Homo Sapiens	AA166699 ANNOTATION OF CHIMERA FUSION GenBank ID: AA166699 FASTA Head Gene (1) Alignment: ITGA1 | OMIM: 192968 Tail Gene (2) Alignment: STXBP3 | OMIM: 608339 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 3672 5 - 52802723 52802868 1 0 protein-coding 6814 1 + 108782422 108796706 10 1 protein-coding 533 hg38 Updated: 2019-02-17 Owner: ChiTaRS	ITGA1 A0A494C0F7 P56199 NM_181501.1	1..26 100.0%	- 5	STXBP3 O00186 NM_007269.3	15..533 99.5%	+ 1	1 0 0	intron-exon
2 Homo Sapiens	DL051784 ANNOTATION OF CHIMERA FUSION GenBank ID: DL051784 FASTA Head Gene (1) Alignment: ITGA1 | OMIM: 192968 Tail Gene (2) Alignment: STXBP3 | OMIM: 608339 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 3672 5 - 52802723 52802868 0 0 protein-coding 6814 1 + 108782422 108796706 6 1 protein-coding 533 hg38 Updated: 2019-03-26 Owner: ChiTaRS	ITGA1 A0A494C0F7 P56199 NM_181501.1	1..26 100.0%	- 5	STXBP3 O00186 NM_007269.3	15..533 99.5%	+ 1	1 0 0	intron-exon
3 Homo Sapiens	DL127842 ANNOTATION OF CHIMERA FUSION GenBank ID: DL127842 FASTA Head Gene (1) Alignment: EPC2 | OMIM: 611000 Tail Gene (2) Alignment: ITGA1 | OMIM: 192968 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 26122 2 + 148697028 148697332 0 0 protein-coding 3672 5 - 52953971 52954352 1 1 protein-coding 396 hg38 Updated: 2019-03-26 Owner: ChiTaRS	EPC2 C9J1X4 E7ETK1 E9PBA8 H7C0K5 Q52LR7 NM_015630.3	1..25 100.0%	+ 2	ITGA1 A0A494C0F7 P56199 ENST00000282588	15..396 99.5%	- 5	1 0 0	intron-exon
4 Homo Sapiens	DM112953 ANNOTATION OF CHIMERA FUSION GenBank ID: DM112953 FASTA Head Gene (1) Alignment: EPC2 | OMIM: 611000 Tail Gene (2) Alignment: ITGA1 | OMIM: 192968 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 26122 2 + 148697028 148697332 0 0 protein-coding 3672 5 - 52953971 52954352 1 1 protein-coding 396 hg38 Updated: 2019-03-26 Owner: ChiTaRS	EPC2 C9J1X4 E7ETK1 E9PBA8 H7C0K5 Q52LR7 NM_015630.3	1..25 100.0%	+ 2	ITGA1 A0A494C0F7 P56199 ENST00000282588	15..396 99.5%	- 5	1 0 0	intron-exon
5 Homo Sapiens	CV416658 ANNOTATION OF CHIMERA FUSION GenBank ID: CV416658 FASTA Head Gene (1) Alignment: ITGA1 | OMIM: 192968 Tail Gene (2) Alignment: PKIB | OMIM: 606914 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 3672 5 - 52857623 52857712 2 0 protein-coding 5570 6 + 122708201 122708493 3 0 protein-coding 387 hg38 Updated: 2019-02-21 Owner: ChiTaRS	ITGA1 A0A494C0F7 P56199 NM_181501.1	14..103 97.8%	- 5	PKIB Q5T0Z6 Q9C010 XM_011535936.1	95..387 99.4%	+ 6	1 0 0	intron-intron
6 Homo Sapiens	T19552 ANNOTATION OF CHIMERA FUSION GenBank ID: T19552 FASTA Head Gene (1) Alignment: ITGA1 | OMIM: 192968 Tail Gene (2) Alignment: RPS6KA2 | OMIM: 601685 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 3672 5 + 52800820 52801030 3 0 protein-coding 6196 6 + 166658172 166658191 1 0 tumor suppressor, protein-coding 216 hg38 Updated: 2018-10-30 Owner: ChiTaRS	ITGA1 A0A494C0F7 P56199	1..209 99.6%	+ 5	RPS6KA2 B7Z3B5 D6R910 D6RA62 D6RD75 D6RE03 D6RHW7 F2Z2J1 Q15349 X5D337 X5DNZ1 X5DPB4	192..211 100.0%	+ 6	1 0 0	intron-intron
7 Homo Sapiens	AI174733 ANNOTATION OF CHIMERA FUSION GenBank ID: AI174733 FASTA Head Gene (1) Alignment: ALB | OMIM: 103600 Tail Gene (2) Alignment: ITGA1 | OMIM: 192968 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 213 4 - 73404291 73406738 3 1 protein-coding 3672 5 + 52956062 52956491 1 1 protein-coding 718 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Serum_albumin (PF00273, IPR014760, SM00103) 176 1298 1361 1.2e-15 43.900 Serum albumin family Updated: 2019-01-29 Owner: ChiTaRS	ALB A0A087WWT3 A0A0C4DGB6 B7WNR0 C9JKR2 D6RCE7 D6RHD5 H0YA55 H7C013 P02768 Q6LEH2 NM_000477.6	1..284 100.0%	- 4	ITGA1 A0A494C0F7 P56199 ENST00000282588	275..703 99.6%	+ 5	1 0 0	exon-exon

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