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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'ITGA1'

Total of fusion sequences: 10 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens
NM_181501.1
14..103
97.8%
-
5

XM_011535936.1
95..387
99.4%
+
6
1
0
0
intron-intron
Homo Sapiens 1..209
99.6%
+
5
192..211
100.0%
+
6
1
0
0
intron-intron
Homo Sapiens
NM_181501.1
1..26
100.0%
-
5
STXBP3
O00186

NM_007269.3
15..533
99.5%
+
1
1
0
0
intron-exon
Homo Sapiens
NM_181501.1
1..26
100.0%
-
5
STXBP3
O00186

NM_007269.3
15..533
99.5%
+
1
1
0
0
intron-exon
Mus musculus
NM_178397.3
1..74
98.7%
+
13

ENSMUST00000061673
63..798
99.5%
-
13
1
0
0
exon-exon
Mus musculus
NM_001033228.3
21..544
97.8%
+
13

XR_383133.3
540..611
100.0%
-
14
1
0
0
intron-intron
Mus musculus
NM_001033228.3
33..218
98.4%
+
13
Pyroxd1
Q3TMV7

XM_006506954.3
219..963
95.9%
+
6
1
0
0
intron-intron
Homo Sapiens
NM_015630.3
1..25
100.0%
+
2

ENST00000282588
15..396
99.5%
-
5
1
0
0
intron-exon
Homo Sapiens
NM_015630.3
1..25
100.0%
+
2

ENST00000282588
15..396
99.5%
-
5
1
0
0
intron-exon
Homo Sapiens
NM_000477.6
1..284
100.0%
-
4

ENST00000282588
275..703
99.6%
+
5
1
0
0
exon-exon

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