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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'ITGA1'

Total of fusion sequences: 7 (from 1493742 parsed EST/mRNAs. Last update 2019-12-11 12:04:16)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens

NM_181501.1
1..26
100.0%
-
5
STXBP3
O00186

NM_007269.3
15..533
99.5%
+
1
1
0
0
intron-exon
2
Homo Sapiens

NM_181501.1
1..26
100.0%
-
5
STXBP3
O00186

NM_007269.3
15..533
99.5%
+
1
1
0
0
intron-exon
3
Homo Sapiens

NM_015630.3
1..25
100.0%
+
2

ENST00000282588
15..396
99.5%
-
5
1
0
0
intron-exon
4
Homo Sapiens

NM_015630.3
1..25
100.0%
+
2

ENST00000282588
15..396
99.5%
-
5
1
0
0
intron-exon
5
Homo Sapiens

NM_181501.1
14..103
97.8%
-
5

XM_011535936.1
95..387
99.4%
+
6
1
0
0
intron-intron
6
Homo Sapiens
1..209
99.6%
+
5
192..211
100.0%
+
6
1
0
0
intron-intron
7
Homo Sapiens

NM_000477.6
1..284
100.0%
-
4

ENST00000282588
275..703
99.6%
+
5
1
0
0
exon-exon

T o p