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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Hnrnpl'

Total of fusion sequences: 9 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus
SplGraphs
XM_006539558.2
1..289
99.0%
+
7

XR_001779966.1
285..432
100.0%
+
11
1
0
0
exon-exon
2
Mus musculus
SplGraphs
XM_006539558.2
2..363
100.0%
+
7

NM_133797.4
359..652
100.0%
-
13
1
0
0
intron-exon
3
Mus musculus

XM_006539558.2
2..160
96.8%
+
7
4930579G24Rik
NM_029482.1
156..1992
100.0%
+
3
1
0
0
exon-exon
4
Mus musculus

XM_006539558.2
13..171
100.0%
+
7
4930579G24Rik
NM_029482.1
167..784
98.3%
+
3
1
0
0
exon-exon
5
Mus musculus

XM_017314496.1
1..218
100.0%
-
11

XM_006539558.2
214..466
100.0%
-
7
1
0
0
exon-intron
6
Mus musculus

XM_006539558.2
18..87
100.0%
-
7

XM_006539558.2
84..438
99.2%
+
7
1
0
0
intron-intron
7
Mus musculus

NM_133668.3
6..171
96.4%
+
10

XM_006539558.2
172..748
98.3%
+
7
1
0
0
exon-exon
8
Mus musculus

XM_006539558.2
10..521
100.0%
-
7

XM_011248073.2
512..1395
100.0%
-
1
1
0
0
exon-exon
9
Mus musculus

XM_006539558.2
1..271
98.6%
+
7

ENSMUST00000084838
263..294
100.0%
-
16
1
0
0
exon-exon

T o p